Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 AC007952.6-201ENST00000573168 2673 ntBASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 AC003957.1-201ENST00000625108 2673 ntBASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 AL359075.1-203ENST00000462729 1002 ntBASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 AC093484.2-201ENST00000580996 2166 ntBASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 AC036111.1-201ENST00000533973 1582 ntBASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 AL032819.2-201ENST00000624543 2162 ntBASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 GCSHP2-201ENST00000560971 527 ntBASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 MIR3180-5-201ENST00000583743 153 ntBASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 MYC-208ENST00000641036 567 ntBASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00588Q9Y4M8 FP475955.4-201ENST00000623131 1990 ntBASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms