Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF6Q9Y252 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF6Q9Y252 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF6Q9Y252 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF6Q9Y252 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF6Q9Y252 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RNF6Q9Y252 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF6Q9Y252 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF6Q9Y252 KRT16P5-201ENST00000455284 522 ntBASIC17.79■□□□□ 0.44
RNF6Q9Y252 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RNF6Q9Y252 NBPF21P-201ENST00000425093 1451 ntBASIC17.79■□□□□ 0.44
RNF6Q9Y252 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF6Q9Y252 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF6Q9Y252 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF6Q9Y252 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 AC018470.1-201ENST00000624790 3129 ntBASIC17.78■□□□□ 0.44
RNF6Q9Y252 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 AL355355.2-201ENST00000442321 338 ntBASIC17.78■□□□□ 0.44
RNF6Q9Y252 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 AF186192.3-201ENST00000583427 947 ntBASIC17.78■□□□□ 0.44
RNF6Q9Y252 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 AC097493.4-201ENST00000641197 219 ntBASIC17.78■□□□□ 0.44
RNF6Q9Y252 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 PHGDH-210ENST00000641115 1638 ntBASIC17.78■□□□□ 0.44
RNF6Q9Y252 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF6Q9Y252 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF6Q9Y252 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF6Q9Y252 TEX21P-204ENST00000641479 1693 ntBASIC17.77■□□□□ 0.44
RNF6Q9Y252 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF6Q9Y252 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF6Q9Y252 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF6Q9Y252 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 AP003071.4-201ENST00000562276 1284 ntBASIC17.77■□□□□ 0.44
RNF6Q9Y252 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF6Q9Y252 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF6Q9Y252 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF6Q9Y252 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms