Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 AC092338.2-201ENST00000568827 1415 ntBASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 AL138966.2-201ENST00000621997 464 ntBASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPA1Q9UND3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 AC063952.2-201ENST00000498792 1227 ntBASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 AL353719.1-201ENST00000566847 864 ntBASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NPIPA1Q9UND3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 Z82202.1-201ENST00000623446 1880 ntBASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 RNF152P1-201ENST00000397754 604 ntBASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 COX11P1-201ENST00000489116 835 ntBASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 AL023803.3-201ENST00000615559 522 ntBASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPA1Q9UND3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.39■□□□□ 0.38
NPIPA1Q9UND3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NPIPA1Q9UND3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPA1Q9UND3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPA1Q9UND3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPA1Q9UND3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
NPIPA1Q9UND3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.39■□□□□ 0.37
NPIPA1Q9UND3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.39■□□□□ 0.37
NPIPA1Q9UND3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms