Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.66■□□□□ 0.9
L1RE1Q9UN81 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.66■□□□□ 0.9
L1RE1Q9UN81 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.66■□□□□ 0.9
L1RE1Q9UN81 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
L1RE1Q9UN81 AC011298.2-201ENST00000617989 482 ntBASIC20.66■□□□□ 0.9
L1RE1Q9UN81 KRT8P9-201ENST00000558927 1449 ntBASIC20.66■□□□□ 0.9
L1RE1Q9UN81 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
L1RE1Q9UN81 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
L1RE1Q9UN81 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
L1RE1Q9UN81 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
L1RE1Q9UN81 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
L1RE1Q9UN81 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
L1RE1Q9UN81 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
L1RE1Q9UN81 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 AC120498.9-201ENST00000339021 3867 ntBASIC20.65■□□□□ 0.9
L1RE1Q9UN81 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 MMP23A-201ENST00000234610 1017 ntBASIC20.65■□□□□ 0.9
L1RE1Q9UN81 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 MIR1238-201ENST00000408483 83 ntBASIC20.65■□□□□ 0.9
L1RE1Q9UN81 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 AC091390.4-202ENST00000476426 537 ntBASIC20.65■□□□□ 0.9
L1RE1Q9UN81 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.65■□□□□ 0.9
L1RE1Q9UN81 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
L1RE1Q9UN81 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.64■□□□□ 0.9
L1RE1Q9UN81 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
L1RE1Q9UN81 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.64■□□□□ 0.9
L1RE1Q9UN81 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
L1RE1Q9UN81 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
L1RE1Q9UN81 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
L1RE1Q9UN81 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 AP000997.3-201ENST00000623333 2250 ntBASIC20.64■□□□□ 0.89
L1RE1Q9UN81 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 AC211429.1-201ENST00000415277 523 ntBASIC20.64■□□□□ 0.89
L1RE1Q9UN81 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 AC104417.2-201ENST00000562989 1793 ntBASIC20.64■□□□□ 0.89
L1RE1Q9UN81 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.64■□□□□ 0.89
L1RE1Q9UN81 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 KRT8P41-201ENST00000533985 1514 ntBASIC20.63■□□□□ 0.89
L1RE1Q9UN81 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 FITM1-202ENST00000559294 800 ntBASIC20.63■□□□□ 0.89
L1RE1Q9UN81 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 DGCR10-201ENST00000609839 495 ntBASIC20.63■□□□□ 0.89
L1RE1Q9UN81 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 ZNF815P-204ENST00000434898 1737 ntBASIC20.63■□□□□ 0.89
L1RE1Q9UN81 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.63■□□□□ 0.89
L1RE1Q9UN81 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
L1RE1Q9UN81 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
L1RE1Q9UN81 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.62■□□□□ 0.89
L1RE1Q9UN81 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
L1RE1Q9UN81 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.62■□□□□ 0.89
L1RE1Q9UN81 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
L1RE1Q9UN81 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
L1RE1Q9UN81 ECEL1P3-201ENST00000427961 737 ntBASIC20.62■□□□□ 0.89
L1RE1Q9UN81 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.62■□□□□ 0.89
L1RE1Q9UN81 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.62■□□□□ 0.89
L1RE1Q9UN81 AP000692.2-201ENST00000608391 879 ntBASIC20.62■□□□□ 0.89
L1RE1Q9UN81 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.62■□□□□ 0.89
L1RE1Q9UN81 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.62■□□□□ 0.89
L1RE1Q9UN81 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
L1RE1Q9UN81 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms