Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 FAM8A6P-201ENST00000407496 1135 ntBASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 NTF6B-201ENST00000591913 560 ntBASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
UBQLN1Q9UMX0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 HOMER2P1-201ENST00000455653 964 ntBASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 AC092647.4-201ENST00000457211 535 ntBASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
UBQLN1Q9UMX0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 AL161938.1-201ENST00000569833 2180 ntBASIC20.24■□□□□ 0.83
UBQLN1Q9UMX0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 ARMC10P1-201ENST00000313754 855 ntBASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 AC008556.1-201ENST00000610908 2040 ntBASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.23■□□□□ 0.83
UBQLN1Q9UMX0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms