Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 AL161938.1-201ENST00000569833 2180 ntBASIC19.96■□□□□ 0.79
CDH9Q9ULB4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.96■□□□□ 0.79
CDH9Q9ULB4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 AC022616.7-201ENST00000525383 220 ntBASIC19.95■□□□□ 0.78
CDH9Q9ULB4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 AL441883.1-201ENST00000566170 1045 ntBASIC19.95■□□□□ 0.78
CDH9Q9ULB4 LINC01238-205ENST00000567549 1107 ntBASIC19.95■□□□□ 0.78
CDH9Q9ULB4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH9Q9ULB4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH9Q9ULB4 AC008556.1-201ENST00000610908 2040 ntBASIC19.93■□□□□ 0.78
CDH9Q9ULB4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 FAM8A6P-201ENST00000407496 1135 ntBASIC19.93■□□□□ 0.78
CDH9Q9ULB4 KRT18P35-201ENST00000510488 1269 ntBASIC19.93■□□□□ 0.78
CDH9Q9ULB4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 AL445228.2-201ENST00000605589 952 ntBASIC19.93■□□□□ 0.78
CDH9Q9ULB4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 AC068587.9-201ENST00000641814 219 ntBASIC19.93■□□□□ 0.78
CDH9Q9ULB4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.93■□□□□ 0.78
CDH9Q9ULB4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH9Q9ULB4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms