Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 AC016734.2-201ENST00000624325 1377 ntBASIC19.7■□□□□ 0.74
DNMT3BQ9UBC3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 TSSC2-201ENST00000450217 709 ntBASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 AC092329.2-201ENST00000598402 547 ntBASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 AL157888.1-201ENST00000631930 593 ntBASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3BQ9UBC3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 AC112497.1-201ENST00000624824 639 ntBASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 PCDHAC2-203ENST00000615316 3011 ntBASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3BQ9UBC3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 BX276092.5-203ENST00000456199 560 ntBASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.67■□□□□ 0.74
DNMT3BQ9UBC3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms