Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 C1QL1P1-201ENST00000568105 661 ntBASIC17.88■□□□□ 0.45
VAPAQ9P0L0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.88■□□□□ 0.45
VAPAQ9P0L0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 HEIH-201ENST00000623091 1652 ntBASIC17.87■□□□□ 0.45
VAPAQ9P0L0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 POM121L13P-201ENST00000422362 380 ntBASIC17.87■□□□□ 0.45
VAPAQ9P0L0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 KRT8P41-201ENST00000533985 1514 ntBASIC17.87■□□□□ 0.45
VAPAQ9P0L0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.87■□□□□ 0.45
VAPAQ9P0L0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 AL499627.1-201ENST00000569373 2188 ntBASIC17.86■□□□□ 0.45
VAPAQ9P0L0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VAPAQ9P0L0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 NBPF21P-201ENST00000425093 1451 ntBASIC17.85■□□□□ 0.45
VAPAQ9P0L0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 AC069152.1-201ENST00000438030 544 ntBASIC17.85■□□□□ 0.45
VAPAQ9P0L0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 PRKY-204ENST00000533551 1019 ntBASIC17.85■□□□□ 0.45
VAPAQ9P0L0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
VAPAQ9P0L0 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.85■□□□□ 0.45
VAPAQ9P0L0 AC133041.1-202ENST00000642053 222 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms