Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.682e-10■■□□□ 14.3
DROSHAQ9NRR4 LSM2-212ENST00000477182 767 ntTSL 318.3■□□□□ 0.522e-10■■□□□ 14.3
DROSHAQ9NRR4 LSM2-210ENST00000470086 713 ntTSL 213.93□□□□□ -0.182e-10■■□□□ 14.3
DROSHAQ9NRR4 TCF25-207ENST00000562256 1879 ntTSL 1 (best)26.72■■□□□ 1.879e-7■■□□□ 14.3
DROSHAQ9NRR4 EEF1AKMT2-202ENST00000464099 1013 ntTSL 1 (best)39.72■■■■□ 3.953e-12■■□□□ 14.3
DROSHAQ9NRR4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.133e-12■■□□□ 14.3
DROSHAQ9NRR4 EEF1AKMT2-203ENST00000466270 3587 ntTSL 1 (best)19.03■□□□□ 0.643e-12■■□□□ 14.3
DROSHAQ9NRR4 AHNAK-208ENST00000533365 584 ntAPPRIS ALT2 TSL 529.81■■■□□ 2.362e-7■■□□□ 14.3
DROSHAQ9NRR4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.352e-6■■□□□ 14.3
DROSHAQ9NRR4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC22.54■■□□□ 1.22e-6■■□□□ 14.3
DROSHAQ9NRR4 TCF25-226ENST00000640279 2688 ntTSL 522.4■■□□□ 1.182e-6■■□□□ 14.3
DROSHAQ9NRR4 PRDX2-203ENST00000466174 1717 ntTSL 1 (best)21.6■■□□□ 1.054e-7■■□□□ 14.2
DROSHAQ9NRR4 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC19.29■□□□□ 0.684e-7■■□□□ 14.2
DROSHAQ9NRR4 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.494e-7■■□□□ 14.2
DROSHAQ9NRR4 PRDX2-204ENST00000477555 699 ntTSL 217.33■□□□□ 0.364e-7■■□□□ 14.2
DROSHAQ9NRR4 HOOK2-213ENST00000589765 108 ntTSL 513.83□□□□□ -0.24e-7■■□□□ 14.2
DROSHAQ9NRR4 AP3D1-209ENST00000591284 580 ntTSL 529.52■■■□□ 2.322e-6■■□□□ 14.2
DROSHAQ9NRR4 NDUFS7-206ENST00000535382 3050 ntTSL 220.39■□□□□ 0.855e-8■■□□□ 14.2
DROSHAQ9NRR4 ICAM5-203ENST00000586480 2599 ntTSL 1 (best)30.39■■■□□ 2.463e-7■■□□□ 14.2
DROSHAQ9NRR4 PTK2-251ENST00000523797 405 ntTSL 335.24■■■■□ 3.234e-14■■□□□ 14.2
DROSHAQ9NRR4 PTK2-257ENST00000524357 535 ntTSL 431.79■■■□□ 2.684e-14■■□□□ 14.2
DROSHAQ9NRR4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.422e-7■■□□□ 14.2
DROSHAQ9NRR4 PTK2-231ENST00000521332 630 ntTSL 429.29■■■□□ 2.284e-14■■□□□ 14.2
DROSHAQ9NRR4 PTK2-254ENST00000524040 475 ntTSL 229.29■■■□□ 2.284e-14■■□□□ 14.2
DROSHAQ9NRR4 PTK2-219ENST00000520045 602 ntTSL 428.47■■■□□ 2.154e-14■■□□□ 14.2
DROSHAQ9NRR4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC28.47■■■□□ 2.154e-14■■□□□ 14.2
DROSHAQ9NRR4 POLR3E-217ENST00000569757 662 ntTSL 426.28■■□□□ 1.82e-7■■□□□ 14.2
DROSHAQ9NRR4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.622e-8■■□□□ 14.2
DROSHAQ9NRR4 PTK2-225ENST00000520892 571 ntTSL 4 BASIC22.1■■□□□ 1.134e-14■■□□□ 14.2
DROSHAQ9NRR4 PTK2-256ENST00000524257 430 ntTSL 416.31■□□□□ 0.24e-14■■□□□ 14.2
DROSHAQ9NRR4 PTK2-234ENST00000521791 556 ntTSL 414.92□□□□□ -0.024e-14■■□□□ 14.2
DROSHAQ9NRR4 PTK2-214ENST00000519635 578 ntTSL 414.63□□□□□ -0.074e-14■■□□□ 14.2
DROSHAQ9NRR4 PTK2-223ENST00000520828 574 ntTSL 413.19□□□□□ -0.34e-14■■□□□ 14.2
DROSHAQ9NRR4 PTK2-205ENST00000517453 571 ntTSL 411.99□□□□□ -0.494e-14■■□□□ 14.2
DROSHAQ9NRR4 PTK2-242ENST00000523067 488 ntTSL 411.74□□□□□ -0.534e-14■■□□□ 14.2
DROSHAQ9NRR4 PTK2-249ENST00000523679 504 ntTSL 311.18□□□□□ -0.624e-14■■□□□ 14.2
DROSHAQ9NRR4 INTS11-227ENST00000525603 738 ntTSL 322.62■■□□□ 1.214e-12■■□□□ 14.2
DROSHAQ9NRR4 SLC27A5-205ENST00000595851 2003 ntTSL 226.8■■□□□ 1.884e-7■■□□□ 14.2
DROSHAQ9NRR4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC34.98■■■■□ 3.192e-8■■□□□ 14.2
DROSHAQ9NRR4 AP2M1-204ENST00000427072 557 ntTSL 430.97■■■□□ 2.552e-8■■□□□ 14.2
DROSHAQ9NRR4 AP2M1-211ENST00000460862 551 ntTSL 430.97■■■□□ 2.552e-8■■□□□ 14.2
DROSHAQ9NRR4 AP2M1-214ENST00000466598 684 ntTSL 230.97■■■□□ 2.552e-8■■□□□ 14.2
DROSHAQ9NRR4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC30.3■■■□□ 2.442e-8■■□□□ 14.2
DROSHAQ9NRR4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC28.39■■■□□ 2.132e-8■■□□□ 14.2
DROSHAQ9NRR4 AP2M1-219ENST00000484469 558 ntTSL 327.9■■■□□ 2.062e-8■■□□□ 14.2
DROSHAQ9NRR4 AP2M1-220ENST00000487958 796 ntTSL 227.6■■■□□ 2.012e-8■■□□□ 14.2
DROSHAQ9NRR4 AP2M1-209ENST00000448139 601 ntTSL 522.73■■□□□ 1.232e-8■■□□□ 14.2
DROSHAQ9NRR4 AP2M1-210ENST00000455925 545 ntTSL 422.15■■□□□ 1.142e-8■■□□□ 14.2
DROSHAQ9NRR4 SRCIN1-211ENST00000612431 1431 ntAPPRIS ALT2 TSL 1 (best)35.3■■■■□ 3.248e-7■■□□□ 14.2
DROSHAQ9NRR4 GNB1-207ENST00000472614 708 ntTSL 234.92■■■■□ 3.181e-12■■□□□ 14.2
DROSHAQ9NRR4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC30.22■■■□□ 2.431e-12■■□□□ 14.2
DROSHAQ9NRR4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.091e-12■■□□□ 14.2
DROSHAQ9NRR4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.861e-12■■□□□ 14.2
DROSHAQ9NRR4 GNB1-204ENST00000439272 602 ntTSL 514.6□□□□□ -0.071e-12■■□□□ 14.2
DROSHAQ9NRR4 HGS-215ENST00000576393 922 ntTSL 232.29■■■□□ 2.764e-6■■□□□ 14.2
DROSHAQ9NRR4 HGS-217ENST00000577012 716 ntTSL 531.63■■■□□ 2.654e-6■■□□□ 14.2
DROSHAQ9NRR4 HGS-205ENST00000571518 644 ntTSL 231.49■■■□□ 2.634e-6■■□□□ 14.2
DROSHAQ9NRR4 HGS-216ENST00000576498 1004 ntTSL 227.62■■■□□ 2.014e-6■■□□□ 14.2
DROSHAQ9NRR4 HGS-208ENST00000572392 824 ntTSL 524.03■■□□□ 1.444e-6■■□□□ 14.2
DROSHAQ9NRR4 HGS-214ENST00000576087 548 ntTSL 423.96■■□□□ 1.434e-6■■□□□ 14.2
DROSHAQ9NRR4 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.325e-6■■□□□ 14.2
DROSHAQ9NRR4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.66■□□□□ 0.265e-6■■□□□ 14.2
DROSHAQ9NRR4 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC12.03□□□□□ -0.485e-6■■□□□ 14.2
DROSHAQ9NRR4 AFDN-204ENST00000366809 4839 ntTSL 1 (best)11.89□□□□□ -0.515e-6■■□□□ 14.2
DROSHAQ9NRR4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.052e-11■■□□□ 14.2
DROSHAQ9NRR4 FBL-210ENST00000599159 1400 ntTSL 1 (best)34.07■■■■□ 3.052e-8■■□□□ 14.2
DROSHAQ9NRR4 FBL-203ENST00000594309 603 ntTSL 233.64■■■□□ 2.982e-8■■□□□ 14.2
DROSHAQ9NRR4 FBL-211ENST00000601274 877 ntTSL 533.64■■■□□ 2.982e-8■■□□□ 14.2
DROSHAQ9NRR4 FBL-209ENST00000599134 500 ntTSL 532.32■■■□□ 2.772e-8■■□□□ 14.2
DROSHAQ9NRR4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.492e-8■■□□□ 14.2
DROSHAQ9NRR4 FBL-208ENST00000598417 581 ntTSL 529.05■■■□□ 2.242e-8■■□□□ 14.2
DROSHAQ9NRR4 FBL-207ENST00000597634 726 ntTSL 523.52■■□□□ 1.362e-8■■□□□ 14.2
DROSHAQ9NRR4 FBL-204ENST00000594443 805 ntTSL 320.68■□□□□ 0.92e-8■■□□□ 14.2
DROSHAQ9NRR4 LZTR1-211ENST00000479606 3442 ntTSL 220.2■□□□□ 0.824e-6■■□□□ 14.2
DROSHAQ9NRR4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.654e-6■■□□□ 14.2
DROSHAQ9NRR4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.88□□□□□ -1.952e-14■■□□□ 14.2
DROSHAQ9NRR4 CDYL-207ENST00000472453 1764 ntTSL 1 (best)38.54■■■■□ 3.768e-9■■□□□ 14.2
DROSHAQ9NRR4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.918e-9■■□□□ 14.2
DROSHAQ9NRR4 CDYL-208ENST00000483019 773 ntTSL 215.67■□□□□ 0.18e-9■■□□□ 14.2
DROSHAQ9NRR4 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC13.87□□□□□ -0.198e-9■■□□□ 14.2
DROSHAQ9NRR4 CDYL-204ENST00000440139 690 ntTSL 313.45□□□□□ -0.268e-9■■□□□ 14.2
DROSHAQ9NRR4 CDYL-209ENST00000491864 614 ntTSL 510.11□□□□□ -0.798e-9■■□□□ 14.2
DROSHAQ9NRR4 OAZ1-206ENST00000589739 657 ntTSL 227.33■■□□□ 1.975e-42■■□□□ 14.2
DROSHAQ9NRR4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.021e-6■■□□□ 14.2
DROSHAQ9NRR4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC20.51■□□□□ 0.871e-6■■□□□ 14.2
DROSHAQ9NRR4 MED15-211ENST00000433831 3267 ntTSL 519.48■□□□□ 0.711e-6■■□□□ 14.2
DROSHAQ9NRR4 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.561e-6■■□□□ 14.2
DROSHAQ9NRR4 MED15-229ENST00000489651 3563 ntTSL 1 (best)16.08■□□□□ 0.171e-6■■□□□ 14.2
DROSHAQ9NRR4 MED15-230ENST00000492381 3619 ntTSL 214.17□□□□□ -0.141e-6■■□□□ 14.2
DROSHAQ9NRR4 LAMTOR5-205ENST00000531779 569 ntTSL 234.06■■■■□ 3.046e-7■■□□□ 14.1
DROSHAQ9NRR4 LAMTOR5-202ENST00000464240 1830 ntTSL 228.74■■■□□ 2.196e-7■■□□□ 14.1
DROSHAQ9NRR4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC26.85■■□□□ 1.896e-7■■□□□ 14.1
DROSHAQ9NRR4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.896e-7■■□□□ 14.1
DROSHAQ9NRR4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC26.85■■□□□ 1.896e-7■■□□□ 14.1
DROSHAQ9NRR4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC24.83■■□□□ 1.576e-7■■□□□ 14.1
DROSHAQ9NRR4 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC19.92■□□□□ 0.786e-7■■□□□ 14.1
DROSHAQ9NRR4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC22.51■■□□□ 1.192e-6■■□□□ 14.1
DROSHAQ9NRR4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC21.24■□□□□ 0.992e-6■■□□□ 14.1
DROSHAQ9NRR4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.852e-6■■□□□ 14.1
DROSHAQ9NRR4 SLC13A5-201ENST00000293800 3176 ntTSL 2 BASIC14.14□□□□□ -0.152e-6■■□□□ 14.1
Retrieved 100 of 16,331 protein–RNA pairs in 125.6 ms