Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 KRT18P23-201ENST00000435622 1283 ntBASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 TPM4P1-201ENST00000436100 807 ntBASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 AL136038.4-201ENST00000603606 1261 ntBASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 AL121672.3-201ENST00000608644 468 ntBASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 AL391807.1-203ENST00000604392 2365 ntBASIC21.74■■□□□ 1.07
RPAP3Q9H6T3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPAP3Q9H6T3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 MIR3180-1-201ENST00000580374 94 ntBASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 MIR3180-3-201ENST00000584616 94 ntBASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPAP3Q9H6T3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 AC026396.1-201ENST00000419388 421 ntBASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 AP002383.4-201ENST00000442518 975 ntBASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 MIR3652-201ENST00000579335 131 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms