Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LHX5Q9H2C1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
LHX5Q9H2C1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX5Q9H2C1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX5Q9H2C1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX5Q9H2C1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LHX5Q9H2C1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
LHX5Q9H2C1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX5Q9H2C1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.94■□□□□ 0.78
LHX5Q9H2C1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
LHX5Q9H2C1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.94■□□□□ 0.78
LHX5Q9H2C1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX5Q9H2C1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 SLC25A1P2-201ENST00000430693 912 ntBASIC19.93■□□□□ 0.78
LHX5Q9H2C1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 KRT18P21-201ENST00000515767 1272 ntBASIC19.93■□□□□ 0.78
LHX5Q9H2C1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.93■□□□□ 0.78
LHX5Q9H2C1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LHX5Q9H2C1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 MMP23A-201ENST00000234610 1017 ntBASIC19.92■□□□□ 0.78
LHX5Q9H2C1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 MIR1238-201ENST00000408483 83 ntBASIC19.92■□□□□ 0.78
LHX5Q9H2C1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 AC097493.4-201ENST00000641197 219 ntBASIC19.92■□□□□ 0.78
LHX5Q9H2C1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 MTMR9LP-203ENST00000426597 1545 ntBASIC19.92■□□□□ 0.78
LHX5Q9H2C1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
LHX5Q9H2C1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.91■□□□□ 0.78
LHX5Q9H2C1 AL109659.2-201ENST00000606809 1674 ntBASIC19.91■□□□□ 0.78
LHX5Q9H2C1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.91■□□□□ 0.78
LHX5Q9H2C1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX5Q9H2C1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX5Q9H2C1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX5Q9H2C1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX5Q9H2C1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX5Q9H2C1 RCC2P3-201ENST00000418112 1537 ntBASIC19.91■□□□□ 0.78
LHX5Q9H2C1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX5Q9H2C1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX5Q9H2C1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LHX5Q9H2C1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 MIR1224-201ENST00000408193 85 ntBASIC19.9■□□□□ 0.78
LHX5Q9H2C1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 AL390955.1-201ENST00000428694 934 ntBASIC19.9■□□□□ 0.78
LHX5Q9H2C1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 AC012306.2-201ENST00000609350 630 ntBASIC19.9■□□□□ 0.78
LHX5Q9H2C1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms