Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 AC092118.2-201ENST00000613495 667 ntBASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD4Q9H0A8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 AC091874.3-201ENST00000512672 1195 ntBASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 AL121832.2-201ENST00000610979 668 ntBASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 AL354751.1-201ENST00000412768 1863 ntBASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD4Q9H0A8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 TSPY21P-201ENST00000433481 731 ntBASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 HLA-B-256ENST00000639848 1089 ntBASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COMMD4Q9H0A8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 AC006970.2-201ENST00000450065 779 ntBASIC16.67■□□□□ 0.26
COMMD4Q9H0A8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms