Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 PGM5P4-201ENST00000421970 445 ntBASIC15.3■□□□□ 0.04
NKX6-2Q9C056 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 AC138907.5-202ENST00000569484 235 ntBASIC15.3■□□□□ 0.04
NKX6-2Q9C056 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NKX6-2Q9C056 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.29■□□□□ 0.04
NKX6-2Q9C056 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 KRT87P-202ENST00000534226 1464 ntBASIC15.28■□□□□ 0.04
NKX6-2Q9C056 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 TSPY26P-201ENST00000476365 1326 ntBASIC15.28■□□□□ 0.04
NKX6-2Q9C056 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-2Q9C056 MIR572-201ENST00000384983 95 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms