Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 MCCD1P2-201ENST00000423228 335 ntBASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 OR7E14P-202ENST00000530490 1290 ntBASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 DUX4L17-201ENST00000557360 1267 ntBASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN3Q9BTN0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.83■□□□□ 0.61
LRFN3Q9BTN0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRFN3Q9BTN0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.83■□□□□ 0.61
LRFN3Q9BTN0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRFN3Q9BTN0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRFN3Q9BTN0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRFN3Q9BTN0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRFN3Q9BTN0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.83■□□□□ 0.61
LRFN3Q9BTN0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN3Q9BTN0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 AC015922.1-201ENST00000421102 1152 ntBASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 AC245100.3-201ENST00000441281 285 ntBASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 MIR4745-201ENST00000577608 62 ntBASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN3Q9BTN0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 RCN1P2-201ENST00000398357 915 ntBASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 AC005336.2-201ENST00000593183 939 ntBASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 AC010240.3-201ENST00000607688 395 ntBASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN3Q9BTN0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms