Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHANK2-AS3Q9BTD1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SHANK2-AS3Q9BTD1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHANK2-AS3Q9BTD1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHANK2-AS3Q9BTD1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.57□□□□□ -0.08
SHANK2-AS3Q9BTD1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SHANK2-AS3Q9BTD1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.57□□□□□ -0.08
SHANK2-AS3Q9BTD1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SHANK2-AS3Q9BTD1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SHANK2-AS3Q9BTD1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHANK2-AS3Q9BTD1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 AC073592.3-201ENST00000625118 1834 ntBASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
SHANK2-AS3Q9BTD1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.55□□□□□ -0.08
SHANK2-AS3Q9BTD1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 MIR935-201ENST00000401179 91 ntBASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.54□□□□□ -0.08
SHANK2-AS3Q9BTD1 AC142086.2-201ENST00000569753 217 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms