Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN18Q99952 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN18Q99952 AL109659.2-201ENST00000606809 1674 ntBASIC21.66■■□□□ 1.06
PTPN18Q99952 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN18Q99952 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN18Q99952 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN18Q99952 KRT8P7-201ENST00000533003 1432 ntBASIC21.65■■□□□ 1.06
PTPN18Q99952 HOXB1-202ENST00000577092 1414 ntBASIC21.65■■□□□ 1.06
PTPN18Q99952 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN18Q99952 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN18Q99952 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN18Q99952 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.65■■□□□ 1.06
PTPN18Q99952 AC092183.1-201ENST00000469884 875 ntBASIC21.65■■□□□ 1.06
PTPN18Q99952 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN18Q99952 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN18Q99952 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.65■■□□□ 1.06
PTPN18Q99952 AC064862.7-201ENST00000604520 867 ntBASIC21.65■■□□□ 1.06
PTPN18Q99952 AL773604.1-201ENST00000617417 272 ntBASIC21.65■■□□□ 1.06
PTPN18Q99952 AC148477.8-201ENST00000624298 468 ntBASIC21.65■■□□□ 1.06
PTPN18Q99952 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.65■■□□□ 1.06
PTPN18Q99952 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN18Q99952 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN18Q99952 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PTPN18Q99952 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.64■■□□□ 1.06
PTPN18Q99952 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PTPN18Q99952 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PTPN18Q99952 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
PTPN18Q99952 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN18Q99952 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.64■■□□□ 1.05
PTPN18Q99952 IGHGP-201ENST00000390555 1178 ntBASIC21.64■■□□□ 1.05
PTPN18Q99952 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
PTPN18Q99952 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.64■■□□□ 1.05
PTPN18Q99952 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN18Q99952 FAM197Y8-203ENST00000450145 560 ntBASIC21.64■■□□□ 1.05
PTPN18Q99952 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
PTPN18Q99952 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.64■■□□□ 1.05
PTPN18Q99952 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.64■■□□□ 1.05
PTPN18Q99952 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.64■■□□□ 1.05
PTPN18Q99952 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.64■■□□□ 1.05
PTPN18Q99952 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.64■■□□□ 1.05
PTPN18Q99952 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.64■■□□□ 1.05
PTPN18Q99952 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PTPN18Q99952 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.64■■□□□ 1.05
PTPN18Q99952 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN18Q99952 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN18Q99952 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN18Q99952 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.64■■□□□ 1.05
PTPN18Q99952 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN18Q99952 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN18Q99952 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN18Q99952 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.63■■□□□ 1.05
PTPN18Q99952 NUS1P2-201ENST00000417358 873 ntBASIC21.63■■□□□ 1.05
PTPN18Q99952 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.63■■□□□ 1.05
PTPN18Q99952 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.63■■□□□ 1.05
PTPN18Q99952 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.63■■□□□ 1.05
PTPN18Q99952 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.63■■□□□ 1.05
PTPN18Q99952 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.63■■□□□ 1.05
PTPN18Q99952 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.63■■□□□ 1.05
PTPN18Q99952 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.63■■□□□ 1.05
PTPN18Q99952 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.63■■□□□ 1.05
PTPN18Q99952 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN18Q99952 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN18Q99952 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
PTPN18Q99952 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.63■■□□□ 1.05
PTPN18Q99952 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN18Q99952 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN18Q99952 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.62■■□□□ 1.05
PTPN18Q99952 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.62■■□□□ 1.05
PTPN18Q99952 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.62■■□□□ 1.05
PTPN18Q99952 RCC2P3-201ENST00000418112 1537 ntBASIC21.62■■□□□ 1.05
PTPN18Q99952 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.62■■□□□ 1.05
PTPN18Q99952 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 AL031284.1-201ENST00000419297 478 ntBASIC21.62■■□□□ 1.05
PTPN18Q99952 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 KRT18P58-201ENST00000527480 1120 ntBASIC21.62■■□□□ 1.05
PTPN18Q99952 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PTPN18Q99952 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.62■■□□□ 1.05
PTPN18Q99952 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.62■■□□□ 1.05
PTPN18Q99952 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN18Q99952 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN18Q99952 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN18Q99952 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN18Q99952 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.61■■□□□ 1.05
PTPN18Q99952 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN18Q99952 POLD2P1-201ENST00000511220 997 ntBASIC21.61■■□□□ 1.05
PTPN18Q99952 AC092865.5-201ENST00000545435 363 ntBASIC21.61■■□□□ 1.05
PTPN18Q99952 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.61■■□□□ 1.05
PTPN18Q99952 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms