Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCNX1Q96RV3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCNX1Q96RV3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCNX1Q96RV3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PCNX1Q96RV3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCNX1Q96RV3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCNX1Q96RV3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCNX1Q96RV3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCNX1Q96RV3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCNX1Q96RV3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.64■□□□□ 0.25
PCNX1Q96RV3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.64■□□□□ 0.25
PCNX1Q96RV3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCNX1Q96RV3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCNX1Q96RV3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 KRT18P31-201ENST00000506277 1292 ntBASIC16.63■□□□□ 0.25
PCNX1Q96RV3 AP002469.2-201ENST00000531724 424 ntBASIC16.63■□□□□ 0.25
PCNX1Q96RV3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 AC024243.1-201ENST00000609234 778 ntBASIC16.63■□□□□ 0.25
PCNX1Q96RV3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.63■□□□□ 0.25
PCNX1Q96RV3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 FAAHP1-202ENST00000446499 1238 ntBASIC16.62■□□□□ 0.25
PCNX1Q96RV3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 TSPY12P-201ENST00000421279 868 ntBASIC16.62■□□□□ 0.25
PCNX1Q96RV3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.62■□□□□ 0.25
PCNX1Q96RV3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 TSPY19P-201ENST00000418461 509 ntBASIC16.61■□□□□ 0.25
PCNX1Q96RV3 TSPY18P-201ENST00000441642 509 ntBASIC16.61■□□□□ 0.25
PCNX1Q96RV3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 AC011498.5-201ENST00000592027 486 ntBASIC16.61■□□□□ 0.25
PCNX1Q96RV3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCNX1Q96RV3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms