Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.08■□□□□ 0.16
CSMD1Q96PZ7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 KRT8P11-201ENST00000409686 1436 ntBASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 AL049840.3-201ENST00000602669 611 ntBASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 AL157888.1-201ENST00000631930 593 ntBASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 AL049796.1-201ENST00000565336 1766 ntBASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 FAM197Y8-203ENST00000450145 560 ntBASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.07■□□□□ 0.16
CSMD1Q96PZ7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 AC073648.2-201ENST00000510116 352 ntBASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 FEM1AP1-201ENST00000431297 1995 ntBASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 GPAT2P1-201ENST00000444924 1672 ntBASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 AC104109.2-201ENST00000602919 1418 ntBASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.06■□□□□ 0.16
CSMD1Q96PZ7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 AC244107.1-201ENST00000442033 332 ntBASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 AC074051.2-201ENST00000565115 352 ntBASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 PHGDH-210ENST00000641115 1638 ntBASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 IGHV3-47-201ENST00000425060 335 ntBASIC16.05■□□□□ 0.16
CSMD1Q96PZ7 FAM8A3P-201ENST00000427218 844 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms