Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 RBM17P1-201ENST00000453646 1190 ntBASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSPG4P5Q96PW8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 CRYGFP-201ENST00000418459 633 ntBASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG4P5Q96PW8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 ANO7L1-203ENST00000602586 1720 ntBASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 AP005242.2-201ENST00000580065 1175 ntBASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 MTMR9LP-203ENST00000426597 1545 ntBASIC19.46■□□□□ 0.71
CSPG4P5Q96PW8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 UNC93B2-201ENST00000285383 730 ntBASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 MIR4497-201ENST00000583208 89 ntBASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 AC008622.2-201ENST00000617006 1229 ntBASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 AC079598.2-202ENST00000546624 1451 ntBASIC19.45■□□□□ 0.7
CSPG4P5Q96PW8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms