Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 RASA4DP-201ENST00000460726 1199 ntBASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 AC034232.1-201ENST00000506026 1064 ntBASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 PRELID1P1-202ENST00000567272 903 ntBASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 RN7SL510P-201ENST00000581311 263 ntBASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 CR769767.2-201ENST00000622735 460 ntBASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 AC246785.2-201ENST00000432512 513 ntBASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC46A1Q96NT5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 AIRN-201ENST00000601203 4374 ntBASIC18.05■□□□□ 0.48
SLC46A1Q96NT5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 FDX1P1-201ENST00000449115 551 ntBASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 TSSC2-201ENST00000450217 709 ntBASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 AC092597.1-201ENST00000487352 616 ntBASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 AC011498.5-201ENST00000592027 486 ntBASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms