Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHDQ96IW2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.07■□□□□ 0.64
SHDQ96IW2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SHDQ96IW2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHDQ96IW2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHDQ96IW2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHDQ96IW2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.06■□□□□ 0.64
SHDQ96IW2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHDQ96IW2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHDQ96IW2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHDQ96IW2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.06■□□□□ 0.64
SHDQ96IW2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SHDQ96IW2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHDQ96IW2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SHDQ96IW2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.06■□□□□ 0.64
SHDQ96IW2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.06■□□□□ 0.64
SHDQ96IW2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHDQ96IW2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.06■□□□□ 0.64
SHDQ96IW2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.06■□□□□ 0.64
SHDQ96IW2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.06■□□□□ 0.64
SHDQ96IW2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.06■□□□□ 0.64
SHDQ96IW2 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.06■□□□□ 0.64
SHDQ96IW2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.06■□□□□ 0.64
SHDQ96IW2 GPR32P1-201ENST00000601788 811 ntBASIC19.06■□□□□ 0.64
SHDQ96IW2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.06■□□□□ 0.64
SHDQ96IW2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHDQ96IW2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.06■□□□□ 0.64
SHDQ96IW2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHDQ96IW2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHDQ96IW2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
SHDQ96IW2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHDQ96IW2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.06■□□□□ 0.64
SHDQ96IW2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHDQ96IW2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.05■□□□□ 0.64
SHDQ96IW2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 AL109659.2-201ENST00000606809 1674 ntBASIC19.05■□□□□ 0.64
SHDQ96IW2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.05■□□□□ 0.64
SHDQ96IW2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SHDQ96IW2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SHDQ96IW2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
SHDQ96IW2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.05■□□□□ 0.64
SHDQ96IW2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.05■□□□□ 0.64
SHDQ96IW2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.05■□□□□ 0.64
SHDQ96IW2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.05■□□□□ 0.64
SHDQ96IW2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.05■□□□□ 0.64
SHDQ96IW2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.05■□□□□ 0.64
SHDQ96IW2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SHDQ96IW2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.05■□□□□ 0.64
SHDQ96IW2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SHDQ96IW2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.05■□□□□ 0.64
SHDQ96IW2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.05■□□□□ 0.64
SHDQ96IW2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHDQ96IW2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
SHDQ96IW2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHDQ96IW2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHDQ96IW2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHDQ96IW2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.04■□□□□ 0.64
SHDQ96IW2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHDQ96IW2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHDQ96IW2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHDQ96IW2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHDQ96IW2 IGHV3-47-201ENST00000425060 335 ntBASIC19.04■□□□□ 0.64
SHDQ96IW2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SHDQ96IW2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.04■□□□□ 0.64
SHDQ96IW2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.04■□□□□ 0.64
SHDQ96IW2 AP001005.1-201ENST00000571755 1248 ntBASIC19.04■□□□□ 0.64
SHDQ96IW2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.04■□□□□ 0.64
SHDQ96IW2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.04■□□□□ 0.64
SHDQ96IW2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.04■□□□□ 0.64
SHDQ96IW2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHDQ96IW2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHDQ96IW2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHDQ96IW2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHDQ96IW2 SDHAP1-207ENST00000440850 2000 ntBASIC19.03■□□□□ 0.64
SHDQ96IW2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.03■□□□□ 0.64
SHDQ96IW2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHDQ96IW2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHDQ96IW2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHDQ96IW2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.03■□□□□ 0.64
SHDQ96IW2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHDQ96IW2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SHDQ96IW2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.03■□□□□ 0.64
SHDQ96IW2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.03■□□□□ 0.64
SHDQ96IW2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.03■□□□□ 0.64
SHDQ96IW2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.03■□□□□ 0.64
SHDQ96IW2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.03■□□□□ 0.64
SHDQ96IW2 REXO1L6P-202ENST00000619970 1078 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms