Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.93■□□□□ 0.94
HPS3Q969F9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.93■□□□□ 0.94
HPS3Q969F9 AP001412.1-201ENST00000608405 714 ntBASIC20.93■□□□□ 0.94
HPS3Q969F9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
HPS3Q969F9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.93■□□□□ 0.94
HPS3Q969F9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.93■□□□□ 0.94
HPS3Q969F9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HPS3Q969F9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.93■□□□□ 0.94
HPS3Q969F9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HPS3Q969F9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HPS3Q969F9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.93■□□□□ 0.94
HPS3Q969F9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HPS3Q969F9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HPS3Q969F9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.93■□□□□ 0.94
HPS3Q969F9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HPS3Q969F9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HPS3Q969F9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HPS3Q969F9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HPS3Q969F9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HPS3Q969F9 AC093525.10-201ENST00000625130 1569 ntBASIC20.93■□□□□ 0.94
HPS3Q969F9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HPS3Q969F9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HPS3Q969F9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.92■□□□□ 0.94
HPS3Q969F9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 WIZP1-201ENST00000531444 2299 ntBASIC20.92■□□□□ 0.94
HPS3Q969F9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.92■□□□□ 0.94
HPS3Q969F9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HPS3Q969F9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
HPS3Q969F9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.92■□□□□ 0.94
HPS3Q969F9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.92■□□□□ 0.94
HPS3Q969F9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.92■□□□□ 0.94
HPS3Q969F9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.92■□□□□ 0.94
HPS3Q969F9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.92■□□□□ 0.94
HPS3Q969F9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.92■□□□□ 0.94
HPS3Q969F9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
HPS3Q969F9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.92■□□□□ 0.94
HPS3Q969F9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
HPS3Q969F9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.92■□□□□ 0.94
HPS3Q969F9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.92■□□□□ 0.94
HPS3Q969F9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.92■□□□□ 0.94
HPS3Q969F9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.92■□□□□ 0.94
HPS3Q969F9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.92■□□□□ 0.94
HPS3Q969F9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS3Q969F9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS3Q969F9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS3Q969F9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS3Q969F9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HPS3Q969F9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS3Q969F9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.91■□□□□ 0.94
HPS3Q969F9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
HPS3Q969F9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
HPS3Q969F9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.91■□□□□ 0.94
HPS3Q969F9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS3Q969F9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.91■□□□□ 0.94
HPS3Q969F9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.91■□□□□ 0.94
HPS3Q969F9 MFAP1P1-201ENST00000442257 1255 ntBASIC20.91■□□□□ 0.94
HPS3Q969F9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.91■□□□□ 0.94
HPS3Q969F9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS3Q969F9 AC097488.1-201ENST00000507834 756 ntBASIC20.91■□□□□ 0.94
HPS3Q969F9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.91■□□□□ 0.94
HPS3Q969F9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS3Q969F9 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.91■□□□□ 0.94
HPS3Q969F9 AC009113.1-201ENST00000570267 2443 ntBASIC20.91■□□□□ 0.94
HPS3Q969F9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.91■□□□□ 0.94
HPS3Q969F9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.91■□□□□ 0.94
HPS3Q969F9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
HPS3Q969F9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS3Q969F9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS3Q969F9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS3Q969F9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS3Q969F9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HPS3Q969F9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.9■□□□□ 0.94
HPS3Q969F9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HPS3Q969F9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
HPS3Q969F9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HPS3Q969F9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HPS3Q969F9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HPS3Q969F9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HPS3Q969F9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.9■□□□□ 0.94
HPS3Q969F9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HPS3Q969F9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.9■□□□□ 0.94
HPS3Q969F9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HPS3Q969F9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HPS3Q969F9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.9■□□□□ 0.94
HPS3Q969F9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms