Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE1Q8NF91 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE1Q8NF91 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
SYNE1Q8NF91 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 LIN28AP1-201ENST00000429574 405 ntBASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 YBX1P10-201ENST00000444752 975 ntBASIC5.82□□□□□ -1.48
SYNE1Q8NF91 GXYLT1P6-201ENST00000456472 1187 ntBASIC5.82□□□□□ -1.48
SYNE1Q8NF91 NDUFV2-AS1-203ENST00000608008 779 ntBASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 AL161772.1-201ENST00000610494 4412 ntBASIC5.82□□□□□ -1.48
SYNE1Q8NF91 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 AC116407.4-201ENST00000623319 1061 ntBASIC5.82□□□□□ -1.48
SYNE1Q8NF91 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TPM4P1-201ENST00000436100 807 ntBASIC5.82□□□□□ -1.48
SYNE1Q8NF91 CNP-204ENST00000472031 1019 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 AL671883.3-201ENST00000603274 991 ntBASIC5.82□□□□□ -1.48
SYNE1Q8NF91 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 RNF152P1-201ENST00000397754 604 ntBASIC5.82□□□□□ -1.48
SYNE1Q8NF91 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 AC008622.2-201ENST00000617006 1229 ntBASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE1Q8NF91 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE1Q8NF91 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC5.81□□□□□ -1.48
SYNE1Q8NF91 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNE1Q8NF91 MIR4674-201ENST00000582457 87 ntBASIC5.81□□□□□ -1.48
SYNE1Q8NF91 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms