Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF550Q7Z398 AC083906.6-201ENST00000641366 219 ntBASIC17.41■□□□□ 0.38
ZNF550Q7Z398 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF550Q7Z398 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ZNF550Q7Z398 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF550Q7Z398 KRT17P2-201ENST00000300992 1314 ntBASIC17.41■□□□□ 0.38
ZNF550Q7Z398 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ZNF550Q7Z398 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZNF550Q7Z398 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF550Q7Z398 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF550Q7Z398 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF550Q7Z398 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF550Q7Z398 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF550Q7Z398 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 Z98044.1-201ENST00000632503 1764 ntBASIC17.4■□□□□ 0.38
ZNF550Q7Z398 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 ECEL1P3-201ENST00000427961 737 ntBASIC17.4■□□□□ 0.38
ZNF550Q7Z398 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 PRSS44-201ENST00000515154 1146 ntBASIC17.4■□□□□ 0.38
ZNF550Q7Z398 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 AL031985.4-201ENST00000642138 673 ntBASIC17.4■□□□□ 0.38
ZNF550Q7Z398 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF550Q7Z398 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF550Q7Z398 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
ZNF550Q7Z398 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF550Q7Z398 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 TSPY15P-201ENST00000457163 923 ntBASIC17.39■□□□□ 0.37
ZNF550Q7Z398 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 AC026271.3-201ENST00000571884 352 ntBASIC17.39■□□□□ 0.37
ZNF550Q7Z398 MIR4785-201ENST00000585005 73 ntBASIC17.39■□□□□ 0.37
ZNF550Q7Z398 AC073195.1-201ENST00000607241 877 ntBASIC17.39■□□□□ 0.37
ZNF550Q7Z398 REXO1L12P-201ENST00000622156 912 ntBASIC17.39■□□□□ 0.37
ZNF550Q7Z398 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ZNF550Q7Z398 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 AC004951.3-201ENST00000418645 1148 ntBASIC17.38■□□□□ 0.37
ZNF550Q7Z398 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF550Q7Z398 BX088651.1-201ENST00000540551 451 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms