Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP1BQ7LBR1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 AC116562.4-201ENST00000641316 2276 ntBASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 AC026271.3-201ENST00000571884 352 ntBASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP1BQ7LBR1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 NEFHP1-201ENST00000412845 2629 ntBASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 REXO1L10P-201ENST00000615707 1290 ntBASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 TCF3P1-201ENST00000423021 1937 ntBASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP1BQ7LBR1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 FZD10-202ENST00000539839 3282 ntBASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP1BQ7LBR1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHMP1BQ7LBR1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.39■□□□□ 0.38
CHMP1BQ7LBR1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHMP1BQ7LBR1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.39■□□□□ 0.38
CHMP1BQ7LBR1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CHMP1BQ7LBR1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CHMP1BQ7LBR1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP1BQ7LBR1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CHMP1BQ7LBR1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP1BQ7LBR1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP1BQ7LBR1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP1BQ7LBR1 MMP23A-201ENST00000234610 1017 ntBASIC17.39■□□□□ 0.37
CHMP1BQ7LBR1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP1BQ7LBR1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms