Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 B3GAT3P1-201ENST00000471720 806 ntBASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 AL049637.2-201ENST00000641778 930 ntBASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 LTB4R2-202ENST00000528054 3092 ntBASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 MIR6786-201ENST00000616843 113 ntBASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 AIRN-201ENST00000601203 4374 ntBASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NHLRC1Q6VVB1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.96■□□□□ 0.31
NHLRC1Q6VVB1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
NHLRC1Q6VVB1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
NHLRC1Q6VVB1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
NHLRC1Q6VVB1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NHLRC1Q6VVB1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NHLRC1Q6VVB1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
NHLRC1Q6VVB1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms