Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C11orf88Q6PI97 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C11orf88Q6PI97 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.44■□□□□ 0.22
C11orf88Q6PI97 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C11orf88Q6PI97 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
C11orf88Q6PI97 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.44■□□□□ 0.22
C11orf88Q6PI97 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C11orf88Q6PI97 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 AP001271.2-201ENST00000624018 1556 ntBASIC16.43■□□□□ 0.22
C11orf88Q6PI97 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.43■□□□□ 0.22
C11orf88Q6PI97 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.43■□□□□ 0.22
C11orf88Q6PI97 POU5F1P3-201ENST00000428824 1078 ntBASIC16.43■□□□□ 0.22
C11orf88Q6PI97 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
C11orf88Q6PI97 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 WIZP1-201ENST00000531444 2299 ntBASIC16.42■□□□□ 0.22
C11orf88Q6PI97 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 AC010980.2-201ENST00000587099 1412 ntBASIC16.42■□□□□ 0.22
C11orf88Q6PI97 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C11orf88Q6PI97 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms