Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 RCC2P3-201ENST00000418112 1537 ntBASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 HOMER2P1-201ENST00000455653 964 ntBASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 AL359075.1-203ENST00000462729 1002 ntBASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 MIR3180-5-201ENST00000583743 153 ntBASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.04■□□□□ 0.96
SWSAP1Q6NVH7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 MYC-208ENST00000641036 567 ntBASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 AC005332.7-201ENST00000614046 2005 ntBASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 AC116562.4-201ENST00000641316 2276 ntBASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SWSAP1Q6NVH7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 AL031133.1-201ENST00000406807 723 ntBASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 KRT18P38-201ENST00000449496 1282 ntBASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 AC008556.1-201ENST00000610908 2040 ntBASIC21.02■□□□□ 0.96
SWSAP1Q6NVH7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.95
SWSAP1Q6NVH7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SWSAP1Q6NVH7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SWSAP1Q6NVH7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms