Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 IGHGP-201ENST00000390555 1178 ntBASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 UPF3AP3-201ENST00000420996 769 ntBASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 AC018712.1-201ENST00000455767 687 ntBASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 PGAM5P1-201ENST00000518923 814 ntBASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 AC104390.1-201ENST00000555663 520 ntBASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 AP001160.2-201ENST00000596071 487 ntBASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 AC008608.2-201ENST00000606089 416 ntBASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCRAQ6ISU1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 CLDN5-201ENST00000403084 2357 ntBASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 KRT8P7-201ENST00000533003 1432 ntBASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 RPS8P6-201ENST00000426177 609 ntBASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 AC011840.4-201ENST00000578471 627 ntBASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 MIR5100-201ENST00000579544 119 ntBASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 AC010327.4-202ENST00000591484 748 ntBASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 AC009237.14-201ENST00000609975 1594 ntBASIC19.44■□□□□ 0.7
PTCRAQ6ISU1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 EP400NL-214ENST00000641289 2402 ntBASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 AP005212.1-201ENST00000581547 1997 ntBASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 FAM215A-202ENST00000632077 792 ntBASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PTCRAQ6ISU1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCRAQ6ISU1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms