Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF43Q68DV7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF43Q68DV7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF43Q68DV7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF43Q68DV7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF43Q68DV7 FAM207BP-201ENST00000447172 505 ntBASIC19.8■□□□□ 0.76
RNF43Q68DV7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 AC097488.1-201ENST00000507834 756 ntBASIC19.8■□□□□ 0.76
RNF43Q68DV7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF43Q68DV7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF43Q68DV7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF43Q68DV7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF43Q68DV7 LINC01465-201ENST00000408887 1940 ntBASIC19.8■□□□□ 0.76
RNF43Q68DV7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RNF43Q68DV7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF43Q68DV7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RNF43Q68DV7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF43Q68DV7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RNF43Q68DV7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.79■□□□□ 0.76
RNF43Q68DV7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.79■□□□□ 0.76
RNF43Q68DV7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF43Q68DV7 AC104417.2-201ENST00000562989 1793 ntBASIC19.79■□□□□ 0.76
RNF43Q68DV7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF43Q68DV7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
RNF43Q68DV7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF43Q68DV7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF43Q68DV7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RNF43Q68DV7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF43Q68DV7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RNF43Q68DV7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RNF43Q68DV7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF43Q68DV7 LIN28AP1-201ENST00000429574 405 ntBASIC19.78■□□□□ 0.76
RNF43Q68DV7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF43Q68DV7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
RNF43Q68DV7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF43Q68DV7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RNF43Q68DV7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF43Q68DV7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF43Q68DV7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF43Q68DV7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF43Q68DV7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
RNF43Q68DV7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF43Q68DV7 AL049812.1-201ENST00000432563 2267 ntBASIC19.77■□□□□ 0.76
RNF43Q68DV7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF43Q68DV7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF43Q68DV7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF43Q68DV7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF43Q68DV7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF43Q68DV7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
RNF43Q68DV7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF43Q68DV7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF43Q68DV7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF43Q68DV7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RNF43Q68DV7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF43Q68DV7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RNF43Q68DV7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF43Q68DV7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF43Q68DV7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF43Q68DV7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF43Q68DV7 EGLN1P1-201ENST00000531623 762 ntBASIC19.77■□□□□ 0.76
RNF43Q68DV7 WWOX-216ENST00000569818 525 ntBASIC19.77■□□□□ 0.76
RNF43Q68DV7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF43Q68DV7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF43Q68DV7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF43Q68DV7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF43Q68DV7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF43Q68DV7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RNF43Q68DV7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF43Q68DV7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
RNF43Q68DV7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF43Q68DV7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms