Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 FP475955.4-201ENST00000623131 1990 ntBASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 FEM1AP3-201ENST00000403722 1741 ntBASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 NAPSB-206ENST00000562112 1266 ntBASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 IRX1P1-201ENST00000438849 1838 ntBASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQA1Q5Y7H0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DQA1Q5Y7H0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 AC073912.3-201ENST00000624414 853 ntBASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA1Q5Y7H0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms