Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 MESTP1-201ENST00000404287 994 ntBASIC22.56■■□□□ 1.2
RNF20Q5VTR2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 NUDT16P1-203ENST00000513809 620 ntBASIC22.56■■□□□ 1.2
RNF20Q5VTR2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 AP000692.2-201ENST00000608391 879 ntBASIC22.56■■□□□ 1.2
RNF20Q5VTR2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 AL049637.2-201ENST00000641778 930 ntBASIC22.56■■□□□ 1.2
RNF20Q5VTR2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF20Q5VTR2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 AC116562.2-201ENST00000507042 360 ntBASIC22.55■■□□□ 1.2
RNF20Q5VTR2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 AC113410.3-201ENST00000623366 203 ntBASIC22.55■■□□□ 1.2
RNF20Q5VTR2 TMEM191A-211ENST00000637163 1067 ntBASIC22.55■■□□□ 1.2
RNF20Q5VTR2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF20Q5VTR2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 DGCR10-201ENST00000609839 495 ntBASIC22.54■■□□□ 1.2
RNF20Q5VTR2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF20Q5VTR2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RNF20Q5VTR2 HEIH-201ENST00000623091 1652 ntBASIC22.52■■□□□ 1.2
RNF20Q5VTR2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF20Q5VTR2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF20Q5VTR2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RNF20Q5VTR2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF20Q5VTR2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF20Q5VTR2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms