Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 MRPL3P1-201ENST00000400109 1033 ntBASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 FOSL1P1-201ENST00000511041 816 ntBASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 PBK-203ENST00000522944 1499 ntTSL 2 BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDC42BPAQ5VT25 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 CDV3-207ENST00000508481 661 ntTSL 3 BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 AL160237.2-201ENST00000556165 472 ntBASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 AP005901.3-202ENST00000581653 237 ntBASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 TP73-AS1-207ENST00000624167 988 ntBASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CDC42BPAQ5VT25 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC28.58■■■□□ 2.17
CDC42BPAQ5VT25 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDC42BPAQ5VT25 AC091607.1-201ENST00000490318 1060 ntBASIC28.58■■■□□ 2.17
CDC42BPAQ5VT25 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDC42BPAQ5VT25 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDC42BPAQ5VT25 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CDC42BPAQ5VT25 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CDC42BPAQ5VT25 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CDC42BPAQ5VT25 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDC42BPAQ5VT25 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC28.58■■■□□ 2.17
CDC42BPAQ5VT25 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CDC42BPAQ5VT25 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CDC42BPAQ5VT25 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CDC42BPAQ5VT25 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC28.57■■■□□ 2.16
CDC42BPAQ5VT25 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CDC42BPAQ5VT25 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC28.57■■■□□ 2.16
CDC42BPAQ5VT25 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC28.57■■■□□ 2.16
CDC42BPAQ5VT25 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CDC42BPAQ5VT25 KRT16P4-201ENST00000453883 522 ntBASIC28.57■■■□□ 2.16
CDC42BPAQ5VT25 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CDC42BPAQ5VT25 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC28.57■■■□□ 2.16
CDC42BPAQ5VT25 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CDC42BPAQ5VT25 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 ABR-204ENST00000543210 1049 ntTSL 2 BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 AC099336.1-202ENST00000602961 463 ntBASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPAQ5VT25 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC28.55■■■□□ 2.16
CDC42BPAQ5VT25 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms