Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23■■□□□ 1.27
TTC39AQ5SRH9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 AL161938.1-201ENST00000569833 2180 ntBASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 AK4P3-201ENST00000418260 669 ntBASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 AC009947.2-201ENST00000444014 672 ntBASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 DUX4L26-201ENST00000489078 1255 ntBASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 COX11P1-201ENST00000489116 835 ntBASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC39AQ5SRH9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 RCC2P3-201ENST00000418112 1537 ntBASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC22.98■■□□□ 1.27
TTC39AQ5SRH9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 AC036111.1-201ENST00000533973 1582 ntBASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 AL023973.1-201ENST00000624619 620 ntBASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
TTC39AQ5SRH9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 AL049812.1-201ENST00000432563 2267 ntBASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 YBX1P2-201ENST00000489612 999 ntBASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC39AQ5SRH9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
TTC39AQ5SRH9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.27
TTC39AQ5SRH9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.95■■□□□ 1.26
TTC39AQ5SRH9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TTC39AQ5SRH9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TTC39AQ5SRH9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TTC39AQ5SRH9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TTC39AQ5SRH9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.95■■□□□ 1.26
TTC39AQ5SRH9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.95■■□□□ 1.26
TTC39AQ5SRH9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.95■■□□□ 1.26
TTC39AQ5SRH9 WWOX-216ENST00000569818 525 ntBASIC22.95■■□□□ 1.26
TTC39AQ5SRH9 MIR3180-5-201ENST00000583743 153 ntBASIC22.95■■□□□ 1.26
TTC39AQ5SRH9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms