Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 FAM8A6P-201ENST00000407496 1135 ntBASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 YBX1P2-201ENST00000489612 999 ntBASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 AL023803.3-201ENST00000615559 522 ntBASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144BQ3MJ40 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 MYC-208ENST00000641036 567 ntBASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CCDC144BQ3MJ40 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 AL160286.2-201ENST00000567150 934 ntBASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC144BQ3MJ40 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC144BQ3MJ40 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC144BQ3MJ40 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
CCDC144BQ3MJ40 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.89■■□□□ 1.1
CCDC144BQ3MJ40 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CCDC144BQ3MJ40 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC144BQ3MJ40 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144BQ3MJ40 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.89■■□□□ 1.09
CCDC144BQ3MJ40 TSPY5P-201ENST00000426936 936 ntBASIC21.89■■□□□ 1.09
CCDC144BQ3MJ40 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.89■■□□□ 1.09
CCDC144BQ3MJ40 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC144BQ3MJ40 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144BQ3MJ40 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144BQ3MJ40 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144BQ3MJ40 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC144BQ3MJ40 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC144BQ3MJ40 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 AL138781.2-201ENST00000617896 1843 ntBASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 AL031133.1-201ENST00000406807 723 ntBASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 UPK3BP1-201ENST00000428678 509 ntBASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 TSPY17P-201ENST00000450329 467 ntBASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 COX11P1-201ENST00000489116 835 ntBASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 AC091076.1-201ENST00000610741 619 ntBASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 AC141257.4-201ENST00000634557 245 ntBASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 AC136944.6-201ENST00000634818 245 ntBASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms