Protein–RNA interactions for Protein: Q2M389

WASHC4, WASH complex subunit 4, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WASHC4Q2M389 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
WASHC4Q2M389 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
WASHC4Q2M389 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.34■■□□□ 1.33
WASHC4Q2M389 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
WASHC4Q2M389 SPDYE13P-201ENST00000445314 798 ntBASIC23.34■■□□□ 1.33
WASHC4Q2M389 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC23.34■■□□□ 1.33
WASHC4Q2M389 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
WASHC4Q2M389 CR769767.2-201ENST00000622735 460 ntBASIC23.34■■□□□ 1.33
WASHC4Q2M389 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
WASHC4Q2M389 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
WASHC4Q2M389 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
WASHC4Q2M389 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
WASHC4Q2M389 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
WASHC4Q2M389 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
WASHC4Q2M389 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
WASHC4Q2M389 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
WASHC4Q2M389 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.33■■□□□ 1.33
WASHC4Q2M389 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
WASHC4Q2M389 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
WASHC4Q2M389 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
WASHC4Q2M389 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
WASHC4Q2M389 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC23.33■■□□□ 1.33
WASHC4Q2M389 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.33■■□□□ 1.33
WASHC4Q2M389 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC23.33■■□□□ 1.33
WASHC4Q2M389 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC23.33■■□□□ 1.33
WASHC4Q2M389 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
WASHC4Q2M389 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.33■■□□□ 1.33
WASHC4Q2M389 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
WASHC4Q2M389 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
WASHC4Q2M389 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
WASHC4Q2M389 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.32
WASHC4Q2M389 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
WASHC4Q2M389 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
WASHC4Q2M389 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.32
WASHC4Q2M389 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.33■■□□□ 1.32
WASHC4Q2M389 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
WASHC4Q2M389 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
WASHC4Q2M389 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.32■■□□□ 1.32
WASHC4Q2M389 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
WASHC4Q2M389 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC23.32■■□□□ 1.32
WASHC4Q2M389 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.32■■□□□ 1.32
WASHC4Q2M389 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.32■■□□□ 1.32
WASHC4Q2M389 ZNF815P-204ENST00000434898 1737 ntBASIC23.32■■□□□ 1.32
WASHC4Q2M389 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
WASHC4Q2M389 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.32■■□□□ 1.32
WASHC4Q2M389 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 AC104417.2-201ENST00000562989 1793 ntBASIC23.32■■□□□ 1.32
WASHC4Q2M389 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC23.32■■□□□ 1.32
WASHC4Q2M389 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
WASHC4Q2M389 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
WASHC4Q2M389 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
WASHC4Q2M389 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
WASHC4Q2M389 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
WASHC4Q2M389 HBZP1-201ENST00000354915 429 ntBASIC23.31■■□□□ 1.32
WASHC4Q2M389 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.31■■□□□ 1.32
WASHC4Q2M389 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
WASHC4Q2M389 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
WASHC4Q2M389 AL691432.3-201ENST00000621860 400 ntBASIC23.31■■□□□ 1.32
WASHC4Q2M389 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
WASHC4Q2M389 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
WASHC4Q2M389 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
WASHC4Q2M389 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.31■■□□□ 1.32
WASHC4Q2M389 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
WASHC4Q2M389 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
WASHC4Q2M389 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
WASHC4Q2M389 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
WASHC4Q2M389 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
WASHC4Q2M389 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.3■■□□□ 1.32
WASHC4Q2M389 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.3■■□□□ 1.32
WASHC4Q2M389 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
WASHC4Q2M389 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
WASHC4Q2M389 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.3■■□□□ 1.32
WASHC4Q2M389 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.3■■□□□ 1.32
WASHC4Q2M389 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.3■■□□□ 1.32
WASHC4Q2M389 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC23.3■■□□□ 1.32
WASHC4Q2M389 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC23.3■■□□□ 1.32
WASHC4Q2M389 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
WASHC4Q2M389 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
WASHC4Q2M389 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
WASHC4Q2M389 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
WASHC4Q2M389 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.3■■□□□ 1.32
WASHC4Q2M389 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
WASHC4Q2M389 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
WASHC4Q2M389 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms