Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RCC2P3-201ENST00000418112 1537 ntBASIC19.02■□□□□ 0.64
AP1S1P61966 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.02■□□□□ 0.64
AP1S1P61966 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.02■□□□□ 0.64
AP1S1P61966 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.02■□□□□ 0.64
AP1S1P61966 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
AP1S1P61966 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
AP1S1P61966 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP1S1P61966 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
AP1S1P61966 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.02■□□□□ 0.63
AP1S1P61966 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
AP1S1P61966 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP1S1P61966 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP1S1P61966 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
AP1S1P61966 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.02■□□□□ 0.63
AP1S1P61966 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S1P61966 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
AP1S1P61966 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
AP1S1P61966 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.01■□□□□ 0.63
AP1S1P61966 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S1P61966 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
AP1S1P61966 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S1P61966 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.01■□□□□ 0.63
AP1S1P61966 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
AP1S1P61966 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S1P61966 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
AP1S1P61966 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S1P61966 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S1P61966 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S1P61966 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
AP1S1P61966 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
AP1S1P61966 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.01■□□□□ 0.63
AP1S1P61966 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.01■□□□□ 0.63
AP1S1P61966 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.01■□□□□ 0.63
AP1S1P61966 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
AP1S1P61966 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.01■□□□□ 0.63
AP1S1P61966 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S1P61966 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S1P61966 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.01■□□□□ 0.63
AP1S1P61966 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
AP1S1P61966 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S1P61966 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S1P61966 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.01■□□□□ 0.63
AP1S1P61966 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.01■□□□□ 0.63
AP1S1P61966 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP1S1P61966 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19■□□□□ 0.63
AP1S1P61966 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
AP1S1P61966 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19■□□□□ 0.63
AP1S1P61966 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
AP1S1P61966 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
AP1S1P61966 MIR3180-5-201ENST00000583743 153 ntBASIC19■□□□□ 0.63
AP1S1P61966 AC068587.9-201ENST00000641814 219 ntBASIC19■□□□□ 0.63
AP1S1P61966 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
AP1S1P61966 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
AP1S1P61966 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
AP1S1P61966 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
AP1S1P61966 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
AP1S1P61966 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
AP1S1P61966 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19■□□□□ 0.63
AP1S1P61966 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19■□□□□ 0.63
AP1S1P61966 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP1S1P61966 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S1P61966 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.99■□□□□ 0.63
AP1S1P61966 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S1P61966 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S1P61966 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S1P61966 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S1P61966 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.99■□□□□ 0.63
AP1S1P61966 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S1P61966 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.99■□□□□ 0.63
AP1S1P61966 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.99■□□□□ 0.63
AP1S1P61966 TERF1P1-201ENST00000311003 1181 ntBASIC18.99■□□□□ 0.63
AP1S1P61966 LIN28AP1-201ENST00000429574 405 ntBASIC18.99■□□□□ 0.63
AP1S1P61966 AL137013.1-201ENST00000432946 1228 ntBASIC18.99■□□□□ 0.63
AP1S1P61966 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms