Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLDN6P56747 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CLDN6P56747 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLDN6P56747 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLDN6P56747 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN6P56747 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLDN6P56747 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN6P56747 AC079776.4-201ENST00000511039 504 ntBASIC18.13■□□□□ 0.49
CLDN6P56747 FOSL1P1-201ENST00000511041 816 ntBASIC18.13■□□□□ 0.49
CLDN6P56747 KRT8P26-201ENST00000534154 1276 ntBASIC18.13■□□□□ 0.49
CLDN6P56747 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 RNF126P1-202ENST00000569893 925 ntBASIC18.13■□□□□ 0.49
CLDN6P56747 AC104692.2-201ENST00000603054 253 ntBASIC18.13■□□□□ 0.49
CLDN6P56747 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CLDN6P56747 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN6P56747 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CLDN6P56747 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CLDN6P56747 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLDN6P56747 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN6P56747 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN6P56747 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLDN6P56747 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN6P56747 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN6P56747 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN6P56747 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN6P56747 SEC1P-202ENST00000473944 940 ntBASIC18.12■□□□□ 0.49
CLDN6P56747 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.12■□□□□ 0.49
CLDN6P56747 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN6P56747 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN6P56747 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLDN6P56747 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN6P56747 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN6P56747 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CLDN6P56747 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN6P56747 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN6P56747 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN6P56747 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN6P56747 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN6P56747 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN6P56747 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN6P56747 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN6P56747 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN6P56747 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLDN6P56747 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLDN6P56747 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLDN6P56747 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
CLDN6P56747 TSPY22P-201ENST00000427496 604 ntBASIC18.11■□□□□ 0.49
CLDN6P56747 CHCHD2P8-201ENST00000429873 447 ntBASIC18.11■□□□□ 0.49
CLDN6P56747 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN6P56747 TPSP2-201ENST00000561760 610 ntBASIC18.11■□□□□ 0.49
CLDN6P56747 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN6P56747 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CLDN6P56747 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.11■□□□□ 0.49
CLDN6P56747 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 GPALPP1-207ENST00000611650 899 ntBASIC18.11■□□□□ 0.49
CLDN6P56747 AC004263.2-201ENST00000617183 678 ntBASIC18.11■□□□□ 0.49
CLDN6P56747 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.11■□□□□ 0.49
CLDN6P56747 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN6P56747 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN6P56747 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN6P56747 AC092667.1-201ENST00000434301 2586 ntBASIC18.1■□□□□ 0.49
CLDN6P56747 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN6P56747 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN6P56747 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN6P56747 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN6P56747 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN6P56747 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN6P56747 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN6P56747 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN6P56747 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms