Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC092338.2-201ENST00000568827 1415 ntBASIC17.12■□□□□ 0.33
SUMO3P55854 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SUMO3P55854 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.11■□□□□ 0.33
SUMO3P55854 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SUMO3P55854 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SUMO3P55854 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.11■□□□□ 0.33
SUMO3P55854 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.11■□□□□ 0.33
SUMO3P55854 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SUMO3P55854 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SUMO3P55854 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SUMO3P55854 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.11■□□□□ 0.33
SUMO3P55854 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
SUMO3P55854 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.11■□□□□ 0.33
SUMO3P55854 MCCD1P1-208ENST00000445732 328 ntBASIC17.11■□□□□ 0.33
SUMO3P55854 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SUMO3P55854 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.11■□□□□ 0.33
SUMO3P55854 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SUMO3P55854 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.11■□□□□ 0.33
SUMO3P55854 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SUMO3P55854 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SUMO3P55854 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SUMO3P55854 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SUMO3P55854 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SUMO3P55854 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SUMO3P55854 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SUMO3P55854 TNXA-203ENST00000507684 2038 ntBASIC17.11■□□□□ 0.33
SUMO3P55854 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SUMO3P55854 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SUMO3P55854 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SUMO3P55854 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SUMO3P55854 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SUMO3P55854 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.1■□□□□ 0.33
SUMO3P55854 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SUMO3P55854 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SUMO3P55854 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SUMO3P55854 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.1■□□□□ 0.33
SUMO3P55854 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 AL023284.2-201ENST00000405850 579 ntBASIC17.1■□□□□ 0.33
SUMO3P55854 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.1■□□□□ 0.33
SUMO3P55854 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 AC008622.2-201ENST00000617006 1229 ntBASIC17.1■□□□□ 0.33
SUMO3P55854 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SUMO3P55854 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SUMO3P55854 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SUMO3P55854 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.1■□□□□ 0.33
SUMO3P55854 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.1■□□□□ 0.33
SUMO3P55854 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMO3P55854 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.1■□□□□ 0.33
SUMO3P55854 Z98044.1-201ENST00000632503 1764 ntBASIC17.1■□□□□ 0.33
SUMO3P55854 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.1■□□□□ 0.33
SUMO3P55854 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
SUMO3P55854 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.09■□□□□ 0.33
SUMO3P55854 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.09■□□□□ 0.33
SUMO3P55854 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.09■□□□□ 0.33
SUMO3P55854 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.09■□□□□ 0.33
SUMO3P55854 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SUMO3P55854 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.09■□□□□ 0.33
SUMO3P55854 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.09■□□□□ 0.33
SUMO3P55854 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.09■□□□□ 0.33
SUMO3P55854 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.09■□□□□ 0.33
SUMO3P55854 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.09■□□□□ 0.33
SUMO3P55854 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.09■□□□□ 0.33
SUMO3P55854 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.09■□□□□ 0.33
SUMO3P55854 AC010947.1-201ENST00000623454 693 ntBASIC17.09■□□□□ 0.33
SUMO3P55854 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SUMO3P55854 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SUMO3P55854 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.09■□□□□ 0.33
SUMO3P55854 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.09■□□□□ 0.33
SUMO3P55854 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.09■□□□□ 0.33
SUMO3P55854 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMO3P55854 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.08■□□□□ 0.33
SUMO3P55854 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.08■□□□□ 0.33
SUMO3P55854 AC098818.2-201ENST00000564925 2320 ntBASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms