Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COPAP53621 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COPAP53621 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
COPAP53621 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.47■□□□□ 0.71
COPAP53621 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COPAP53621 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COPAP53621 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COPAP53621 BX664615.1-201ENST00000443558 458 ntBASIC19.47■□□□□ 0.71
COPAP53621 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.47■□□□□ 0.71
COPAP53621 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COPAP53621 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.47■□□□□ 0.71
COPAP53621 AL138966.2-201ENST00000621997 464 ntBASIC19.47■□□□□ 0.71
COPAP53621 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.47■□□□□ 0.71
COPAP53621 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COPAP53621 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
COPAP53621 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COPAP53621 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COPAP53621 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COPAP53621 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.47■□□□□ 0.71
COPAP53621 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
COPAP53621 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
COPAP53621 Z82202.1-201ENST00000623446 1880 ntBASIC19.46■□□□□ 0.71
COPAP53621 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
COPAP53621 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
COPAP53621 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COPAP53621 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.46■□□□□ 0.71
COPAP53621 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COPAP53621 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COPAP53621 AC010653.2-201ENST00000623505 997 ntBASIC19.46■□□□□ 0.71
COPAP53621 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COPAP53621 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.46■□□□□ 0.71
COPAP53621 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COPAP53621 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COPAP53621 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COPAP53621 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COPAP53621 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
COPAP53621 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COPAP53621 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COPAP53621 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COPAP53621 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.46■□□□□ 0.71
COPAP53621 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COPAP53621 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
COPAP53621 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COPAP53621 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.7
COPAP53621 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
COPAP53621 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPAP53621 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
COPAP53621 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPAP53621 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPAP53621 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.45■□□□□ 0.7
COPAP53621 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPAP53621 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
COPAP53621 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
COPAP53621 AC117947.1-201ENST00000427448 529 ntBASIC19.45■□□□□ 0.7
COPAP53621 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPAP53621 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COPAP53621 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPAP53621 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COPAP53621 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.45■□□□□ 0.7
COPAP53621 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPAP53621 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.45■□□□□ 0.7
COPAP53621 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPAP53621 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
COPAP53621 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.45■□□□□ 0.7
COPAP53621 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COPAP53621 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPAP53621 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPAP53621 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.45■□□□□ 0.7
COPAP53621 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.45■□□□□ 0.7
COPAP53621 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COPAP53621 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
COPAP53621 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPAP53621 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPAP53621 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPAP53621 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPAP53621 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COPAP53621 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
COPAP53621 AK4P3-201ENST00000418260 669 ntBASIC19.44■□□□□ 0.7
COPAP53621 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.44■□□□□ 0.7
COPAP53621 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
COPAP53621 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.44■□□□□ 0.7
COPAP53621 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.44■□□□□ 0.7
COPAP53621 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPAP53621 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COPAP53621 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.44■□□□□ 0.7
COPAP53621 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPAP53621 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPAP53621 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.44■□□□□ 0.7
COPAP53621 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPAP53621 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPAP53621 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPAP53621 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.44■□□□□ 0.7
COPAP53621 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPAP53621 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.43■□□□□ 0.7
COPAP53621 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPAP53621 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COPAP53621 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.43■□□□□ 0.7
COPAP53621 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
COPAP53621 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPAP53621 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms