Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NEK3P51956 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NEK3P51956 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NEK3P51956 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK3P51956 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK3P51956 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK3P51956 AC006333.2-201ENST00000607957 2099 ntBASIC19.47■□□□□ 0.71
NEK3P51956 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK3P51956 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NEK3P51956 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK3P51956 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK3P51956 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.47■□□□□ 0.71
NEK3P51956 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK3P51956 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.47■□□□□ 0.71
NEK3P51956 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NEK3P51956 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NEK3P51956 AC004951.3-201ENST00000418645 1148 ntBASIC19.47■□□□□ 0.71
NEK3P51956 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.47■□□□□ 0.71
NEK3P51956 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.47■□□□□ 0.71
NEK3P51956 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
NEK3P51956 AC011298.2-201ENST00000617989 482 ntBASIC19.47■□□□□ 0.71
NEK3P51956 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.47■□□□□ 0.71
NEK3P51956 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK3P51956 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NEK3P51956 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.47■□□□□ 0.71
NEK3P51956 KRT8P9-201ENST00000558927 1449 ntBASIC19.47■□□□□ 0.71
NEK3P51956 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NEK3P51956 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK3P51956 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.47■□□□□ 0.71
NEK3P51956 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.47■□□□□ 0.71
NEK3P51956 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.47■□□□□ 0.71
NEK3P51956 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.47■□□□□ 0.71
NEK3P51956 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEK3P51956 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NEK3P51956 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
NEK3P51956 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NEK3P51956 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.46■□□□□ 0.71
NEK3P51956 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.46■□□□□ 0.71
NEK3P51956 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.46■□□□□ 0.71
NEK3P51956 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.46■□□□□ 0.71
NEK3P51956 NAPSB-206ENST00000562112 1266 ntBASIC19.46■□□□□ 0.71
NEK3P51956 AL160286.2-201ENST00000567150 934 ntBASIC19.46■□□□□ 0.71
NEK3P51956 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NEK3P51956 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.46■□□□□ 0.71
NEK3P51956 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.46■□□□□ 0.71
NEK3P51956 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 TEX21P-204ENST00000641479 1693 ntBASIC19.46■□□□□ 0.71
NEK3P51956 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEK3P51956 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NEK3P51956 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.45■□□□□ 0.7
NEK3P51956 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NEK3P51956 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.45■□□□□ 0.7
NEK3P51956 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.45■□□□□ 0.7
NEK3P51956 Z85996.1-201ENST00000494644 937 ntBASIC19.45■□□□□ 0.7
NEK3P51956 AP005242.2-201ENST00000580065 1175 ntBASIC19.45■□□□□ 0.7
NEK3P51956 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.45■□□□□ 0.7
NEK3P51956 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.45■□□□□ 0.7
NEK3P51956 AC130371.2-201ENST00000619443 611 ntBASIC19.45■□□□□ 0.7
NEK3P51956 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 AC007613.1-201ENST00000572811 2597 ntBASIC19.45■□□□□ 0.7
NEK3P51956 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NEK3P51956 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NEK3P51956 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.45■□□□□ 0.7
NEK3P51956 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NEK3P51956 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NEK3P51956 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEK3P51956 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.44■□□□□ 0.7
NEK3P51956 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.44■□□□□ 0.7
NEK3P51956 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NEK3P51956 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.44■□□□□ 0.7
NEK3P51956 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK3P51956 AC141586.3-201ENST00000562166 1838 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms