Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR4P51571 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR4P51571 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR4P51571 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSR4P51571 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SSR4P51571 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SSR4P51571 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SSR4P51571 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.34■□□□□ 0.37
SSR4P51571 TSPY5P-201ENST00000426936 936 ntBASIC17.34■□□□□ 0.37
SSR4P51571 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR4P51571 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR4P51571 AC063952.2-201ENST00000498792 1227 ntBASIC17.34■□□□□ 0.37
SSR4P51571 AC022616.7-201ENST00000525383 220 ntBASIC17.34■□□□□ 0.37
SSR4P51571 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.34■□□□□ 0.37
SSR4P51571 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.34■□□□□ 0.37
SSR4P51571 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.34■□□□□ 0.37
SSR4P51571 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.34■□□□□ 0.37
SSR4P51571 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.34■□□□□ 0.37
SSR4P51571 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.34■□□□□ 0.37
SSR4P51571 WWOX-216ENST00000569818 525 ntBASIC17.34■□□□□ 0.37
SSR4P51571 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.34■□□□□ 0.37
SSR4P51571 AC011558.1-201ENST00000623459 338 ntBASIC17.34■□□□□ 0.37
SSR4P51571 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR4P51571 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.33■□□□□ 0.37
SSR4P51571 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.33■□□□□ 0.37
SSR4P51571 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SSR4P51571 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.33■□□□□ 0.37
SSR4P51571 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSR4P51571 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.33■□□□□ 0.37
SSR4P51571 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.33■□□□□ 0.37
SSR4P51571 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSR4P51571 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SSR4P51571 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR4P51571 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.33■□□□□ 0.36
SSR4P51571 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.33■□□□□ 0.36
SSR4P51571 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSR4P51571 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR4P51571 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR4P51571 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
SSR4P51571 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.33■□□□□ 0.36
SSR4P51571 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.33■□□□□ 0.36
SSR4P51571 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSR4P51571 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.33■□□□□ 0.36
SSR4P51571 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.33■□□□□ 0.36
SSR4P51571 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.33■□□□□ 0.36
SSR4P51571 MIR3180-5-201ENST00000583743 153 ntBASIC17.33■□□□□ 0.36
SSR4P51571 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.33■□□□□ 0.36
SSR4P51571 NTF6B-201ENST00000591913 560 ntBASIC17.33■□□□□ 0.36
SSR4P51571 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SSR4P51571 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR4P51571 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSR4P51571 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR4P51571 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR4P51571 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.33■□□□□ 0.36
SSR4P51571 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
SSR4P51571 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR4P51571 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR4P51571 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.33■□□□□ 0.36
SSR4P51571 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR4P51571 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR4P51571 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR4P51571 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR4P51571 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.32■□□□□ 0.36
SSR4P51571 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR4P51571 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.32■□□□□ 0.36
SSR4P51571 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR4P51571 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR4P51571 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.32■□□□□ 0.36
SSR4P51571 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.32■□□□□ 0.36
SSR4P51571 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.32■□□□□ 0.36
SSR4P51571 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR4P51571 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SSR4P51571 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.32■□□□□ 0.36
SSR4P51571 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.32■□□□□ 0.36
SSR4P51571 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.32■□□□□ 0.36
SSR4P51571 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
SSR4P51571 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR4P51571 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR4P51571 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR4P51571 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.32■□□□□ 0.36
SSR4P51571 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR4P51571 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR4P51571 AC036111.1-201ENST00000533973 1582 ntBASIC17.32■□□□□ 0.36
SSR4P51571 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.31■□□□□ 0.36
SSR4P51571 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR4P51571 AL512353.2-201ENST00000448759 1962 ntBASIC17.31■□□□□ 0.36
SSR4P51571 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSR4P51571 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SSR4P51571 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSR4P51571 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR4P51571 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR4P51571 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR4P51571 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR4P51571 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR4P51571 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR4P51571 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.31■□□□□ 0.36
SSR4P51571 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR4P51571 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR4P51571 HOMER2P1-201ENST00000455653 964 ntBASIC17.31■□□□□ 0.36
SSR4P51571 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms