Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
PCP4P48539 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.07□□□□□ -0.32
PCP4P48539 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
PCP4P48539 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
PCP4P48539 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.07□□□□□ -0.32
PCP4P48539 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.07□□□□□ -0.32
PCP4P48539 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
PCP4P48539 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PCP4P48539 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PCP4P48539 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.06□□□□□ -0.32
PCP4P48539 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
PCP4P48539 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
PCP4P48539 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PCP4P48539 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PCP4P48539 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
PCP4P48539 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PCP4P48539 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PCP4P48539 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
PCP4P48539 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
PCP4P48539 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
PCP4P48539 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
PCP4P48539 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.06□□□□□ -0.32
PCP4P48539 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.06□□□□□ -0.32
PCP4P48539 AC007950.2-201ENST00000615045 2347 ntBASIC13.06□□□□□ -0.32
PCP4P48539 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.06□□□□□ -0.32
PCP4P48539 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
PCP4P48539 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.06□□□□□ -0.32
PCP4P48539 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCP4P48539 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PCP4P48539 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PCP4P48539 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
PCP4P48539 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PCP4P48539 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 AC092384.3-202ENST00000564646 2873 ntBASIC13.05□□□□□ -0.32
PCP4P48539 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.05□□□□□ -0.32
PCP4P48539 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC13.05□□□□□ -0.32
PCP4P48539 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC13.05□□□□□ -0.32
PCP4P48539 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
PCP4P48539 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.05□□□□□ -0.32
PCP4P48539 AC009090.5-201ENST00000624886 2285 ntBASIC13.05□□□□□ -0.32
PCP4P48539 AC006128.1-201ENST00000624704 1661 ntBASIC13.05□□□□□ -0.32
PCP4P48539 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
PCP4P48539 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
PCP4P48539 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCP4P48539 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 AC010327.5-201ENST00000586923 3061 ntBASIC13.04□□□□□ -0.32
PCP4P48539 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
PCP4P48539 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
PCP4P48539 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
PCP4P48539 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.04□□□□□ -0.32
PCP4P48539 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PCP4P48539 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
PCP4P48539 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.04□□□□□ -0.32
PCP4P48539 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms