Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP13P45452 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP13P45452 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP13P45452 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.65■□□□□ 0.74
MMP13P45452 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MMP13P45452 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MMP13P45452 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.65■□□□□ 0.74
MMP13P45452 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
MMP13P45452 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MMP13P45452 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.65■□□□□ 0.74
MMP13P45452 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.65■□□□□ 0.74
MMP13P45452 AC073195.1-201ENST00000607241 877 ntBASIC19.65■□□□□ 0.74
MMP13P45452 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.65■□□□□ 0.74
MMP13P45452 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.65■□□□□ 0.74
MMP13P45452 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
MMP13P45452 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP13P45452 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
MMP13P45452 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP13P45452 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP13P45452 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
MMP13P45452 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP13P45452 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP13P45452 Z98044.1-201ENST00000632503 1764 ntBASIC19.65■□□□□ 0.74
MMP13P45452 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP13P45452 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP13P45452 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.65■□□□□ 0.74
MMP13P45452 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MMP13P45452 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MMP13P45452 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.64■□□□□ 0.74
MMP13P45452 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP13P45452 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP13P45452 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
MMP13P45452 RPS2P55-201ENST00000397318 883 ntBASIC19.64■□□□□ 0.73
MMP13P45452 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MMP13P45452 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.64■□□□□ 0.73
MMP13P45452 AC107956.1-201ENST00000494359 873 ntBASIC19.64■□□□□ 0.73
MMP13P45452 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.64■□□□□ 0.73
MMP13P45452 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.64■□□□□ 0.73
MMP13P45452 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.64■□□□□ 0.73
MMP13P45452 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.64■□□□□ 0.73
MMP13P45452 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP13P45452 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.64■□□□□ 0.73
MMP13P45452 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP13P45452 KRT16P1-201ENST00000399124 1418 ntBASIC19.64■□□□□ 0.73
MMP13P45452 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.64■□□□□ 0.73
MMP13P45452 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.64■□□□□ 0.73
MMP13P45452 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.64■□□□□ 0.73
MMP13P45452 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP13P45452 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.64■□□□□ 0.73
MMP13P45452 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP13P45452 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MMP13P45452 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
MMP13P45452 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MMP13P45452 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MMP13P45452 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MMP13P45452 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 AC012618.2-201ENST00000428058 849 ntBASIC19.63■□□□□ 0.73
MMP13P45452 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.63■□□□□ 0.73
MMP13P45452 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.63■□□□□ 0.73
MMP13P45452 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.63■□□□□ 0.73
MMP13P45452 CR392000.1-201ENST00000624770 1228 ntBASIC19.63■□□□□ 0.73
MMP13P45452 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.63■□□□□ 0.73
MMP13P45452 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MMP13P45452 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.63■□□□□ 0.73
MMP13P45452 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP13P45452 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP13P45452 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP13P45452 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.62■□□□□ 0.73
MMP13P45452 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP13P45452 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP13P45452 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP13P45452 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP13P45452 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP13P45452 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.62■□□□□ 0.73
MMP13P45452 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP13P45452 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP13P45452 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.62■□□□□ 0.73
MMP13P45452 AC008550.1-201ENST00000511500 884 ntBASIC19.62■□□□□ 0.73
MMP13P45452 AC233702.5-201ENST00000584107 538 ntBASIC19.62■□□□□ 0.73
MMP13P45452 AC131212.4-201ENST00000623606 975 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms