Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCLP35914 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCLP35914 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HMGCLP35914 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCLP35914 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HMGCLP35914 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.81■□□□□ 0.6
HMGCLP35914 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HMGCLP35914 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCLP35914 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.81■□□□□ 0.6
HMGCLP35914 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCLP35914 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.81■□□□□ 0.6
HMGCLP35914 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCLP35914 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.81■□□□□ 0.6
HMGCLP35914 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCLP35914 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGCLP35914 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.81■□□□□ 0.6
HMGCLP35914 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HMGCLP35914 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCLP35914 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCLP35914 AL109659.2-201ENST00000606809 1674 ntBASIC18.81■□□□□ 0.6
HMGCLP35914 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGCLP35914 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HMGCLP35914 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCLP35914 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.81■□□□□ 0.6
HMGCLP35914 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HMGCLP35914 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HMGCLP35914 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCLP35914 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCLP35914 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
HMGCLP35914 CROCCP3-202ENST00000420820 1947 ntBASIC18.8■□□□□ 0.6
HMGCLP35914 RCC2P3-201ENST00000418112 1537 ntBASIC18.8■□□□□ 0.6
HMGCLP35914 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCLP35914 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGCLP35914 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCLP35914 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGCLP35914 AP003041.3-201ENST00000527151 707 ntBASIC18.8■□□□□ 0.6
HMGCLP35914 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGCLP35914 AC145285.6-201ENST00000604632 637 ntBASIC18.8■□□□□ 0.6
HMGCLP35914 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
HMGCLP35914 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HMGCLP35914 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCLP35914 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGCLP35914 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HMGCLP35914 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGCLP35914 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
HMGCLP35914 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCLP35914 GPAT2P1-201ENST00000444924 1672 ntBASIC18.79■□□□□ 0.6
HMGCLP35914 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCLP35914 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGCLP35914 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCLP35914 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGCLP35914 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCLP35914 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCLP35914 AL023284.2-201ENST00000405850 579 ntBASIC18.79■□□□□ 0.6
HMGCLP35914 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
HMGCLP35914 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCLP35914 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.79■□□□□ 0.6
HMGCLP35914 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCLP35914 AC093525.10-201ENST00000625130 1569 ntBASIC18.79■□□□□ 0.6
HMGCLP35914 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HMGCLP35914 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCLP35914 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCLP35914 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGCLP35914 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCLP35914 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCLP35914 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCLP35914 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCLP35914 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCLP35914 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGCLP35914 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCLP35914 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGCLP35914 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.78■□□□□ 0.6
HMGCLP35914 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
HMGCLP35914 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGCLP35914 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.78■□□□□ 0.6
HMGCLP35914 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCLP35914 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGCLP35914 LINC01568-207ENST00000641790 1380 ntBASIC18.78■□□□□ 0.6
HMGCLP35914 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGCLP35914 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCLP35914 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGCLP35914 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGCLP35914 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGCLP35914 KRT18P22-201ENST00000402024 1347 ntBASIC18.77■□□□□ 0.6
HMGCLP35914 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCLP35914 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGCLP35914 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGCLP35914 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGCLP35914 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCLP35914 INGX-201ENST00000359239 846 ntBASIC18.77■□□□□ 0.6
HMGCLP35914 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.77■□□□□ 0.6
HMGCLP35914 MIR4674-201ENST00000582457 87 ntBASIC18.77■□□□□ 0.6
HMGCLP35914 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGCLP35914 AC012306.2-201ENST00000609350 630 ntBASIC18.77■□□□□ 0.6
HMGCLP35914 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCLP35914 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCLP35914 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCLP35914 AC120498.9-201ENST00000339021 3867 ntBASIC18.77■□□□□ 0.6
HMGCLP35914 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCLP35914 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms