Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.49■■□□□ 1.03
CLCN1P35523 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CLCN1P35523 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN1P35523 AC135776.1-201ENST00000319817 2481 ntBASIC21.49■■□□□ 1.03
CLCN1P35523 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN1P35523 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN1P35523 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN1P35523 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
CLCN1P35523 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CLCN1P35523 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN1P35523 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.48■■□□□ 1.03
CLCN1P35523 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CLCN1P35523 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN1P35523 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CLCN1P35523 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN1P35523 AF201337.1-201ENST00000520239 748 ntBASIC21.48■■□□□ 1.03
CLCN1P35523 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN1P35523 AC105036.2-201ENST00000569468 176 ntBASIC21.48■■□□□ 1.03
CLCN1P35523 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.48■■□□□ 1.03
CLCN1P35523 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN1P35523 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.48■■□□□ 1.03
CLCN1P35523 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.48■■□□□ 1.03
CLCN1P35523 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN1P35523 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.48■■□□□ 1.03
CLCN1P35523 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN1P35523 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CLCN1P35523 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN1P35523 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN1P35523 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN1P35523 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CLCN1P35523 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.47■■□□□ 1.03
CLCN1P35523 CICP6-201ENST00000457191 2729 ntBASIC21.47■■□□□ 1.03
CLCN1P35523 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.47■■□□□ 1.03
CLCN1P35523 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN1P35523 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN1P35523 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.47■■□□□ 1.03
CLCN1P35523 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN1P35523 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.47■■□□□ 1.03
CLCN1P35523 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.47■■□□□ 1.03
CLCN1P35523 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN1P35523 AL589743.5-201ENST00000616611 1050 ntBASIC21.47■■□□□ 1.03
CLCN1P35523 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC21.47■■□□□ 1.03
CLCN1P35523 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CLCN1P35523 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CLCN1P35523 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN1P35523 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN1P35523 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN1P35523 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN1P35523 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN1P35523 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN1P35523 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CLCN1P35523 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC21.46■■□□□ 1.03
CLCN1P35523 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CLCN1P35523 AC141586.3-201ENST00000562166 1838 ntBASIC21.46■■□□□ 1.03
CLCN1P35523 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCN1P35523 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.46■■□□□ 1.03
CLCN1P35523 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC21.46■■□□□ 1.03
CLCN1P35523 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CLCN1P35523 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCN1P35523 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLCN1P35523 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCN1P35523 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.46■■□□□ 1.03
CLCN1P35523 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCN1P35523 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCN1P35523 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCN1P35523 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.46■■□□□ 1.03
CLCN1P35523 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CLCN1P35523 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.46■■□□□ 1.03
CLCN1P35523 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.46■■□□□ 1.03
CLCN1P35523 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CLCN1P35523 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CLCN1P35523 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCN1P35523 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCN1P35523 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
CLCN1P35523 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.45■■□□□ 1.02
CLCN1P35523 AL513477.1-201ENST00000602865 2407 ntBASIC21.45■■□□□ 1.02
CLCN1P35523 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN1P35523 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.45■■□□□ 1.02
CLCN1P35523 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN1P35523 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.45■■□□□ 1.02
CLCN1P35523 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.45■■□□□ 1.02
CLCN1P35523 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN1P35523 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN1P35523 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN1P35523 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.45■■□□□ 1.02
CLCN1P35523 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN1P35523 AL118508.1-201ENST00000613502 2345 ntBASIC21.45■■□□□ 1.02
CLCN1P35523 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN1P35523 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN1P35523 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN1P35523 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.45■■□□□ 1.02
CLCN1P35523 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN1P35523 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.45■■□□□ 1.02
CLCN1P35523 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC21.45■■□□□ 1.02
CLCN1P35523 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
CLCN1P35523 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.44■■□□□ 1.02
CLCN1P35523 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.44■■□□□ 1.02
CLCN1P35523 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN1P35523 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms