Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFC4P35249 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RFC4P35249 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RFC4P35249 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.74■■□□□ 1.39
RFC4P35249 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.74■■□□□ 1.39
RFC4P35249 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC23.74■■□□□ 1.39
RFC4P35249 PENK-208ENST00000523051 772 ntTSL 5 BASIC23.74■■□□□ 1.39
RFC4P35249 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.74■■□□□ 1.39
RFC4P35249 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
RFC4P35249 VPS51-217ENST00000639871 243 ntTSL 5 BASIC23.74■■□□□ 1.39
RFC4P35249 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFC4P35249 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.74■■□□□ 1.39
RFC4P35249 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC23.74■■□□□ 1.39
RFC4P35249 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFC4P35249 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.73■■□□□ 1.39
RFC4P35249 AL109659.2-201ENST00000606809 1674 ntBASIC23.73■■□□□ 1.39
RFC4P35249 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFC4P35249 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFC4P35249 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.73■■□□□ 1.39
RFC4P35249 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.73■■□□□ 1.39
RFC4P35249 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFC4P35249 TEX30-205ENST00000376029 959 ntTSL 2 BASIC23.73■■□□□ 1.39
RFC4P35249 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC23.73■■□□□ 1.39
RFC4P35249 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.73■■□□□ 1.39
RFC4P35249 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
RFC4P35249 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.73■■□□□ 1.39
RFC4P35249 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RFC4P35249 BX640515.1-201ENST00000617215 977 ntBASIC23.73■■□□□ 1.39
RFC4P35249 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RFC4P35249 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFC4P35249 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFC4P35249 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFC4P35249 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.73■■□□□ 1.39
RFC4P35249 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RFC4P35249 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RFC4P35249 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFC4P35249 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFC4P35249 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.72■■□□□ 1.39
RFC4P35249 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC23.72■■□□□ 1.39
RFC4P35249 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC23.72■■□□□ 1.39
RFC4P35249 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC23.72■■□□□ 1.39
RFC4P35249 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.72■■□□□ 1.39
RFC4P35249 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
RFC4P35249 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFC4P35249 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFC4P35249 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFC4P35249 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.72■■□□□ 1.39
RFC4P35249 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RFC4P35249 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFC4P35249 AC008556.1-201ENST00000610908 2040 ntBASIC23.72■■□□□ 1.39
RFC4P35249 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RFC4P35249 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RFC4P35249 AC099778.1-201ENST00000568593 1911 ntBASIC23.71■■□□□ 1.39
RFC4P35249 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RFC4P35249 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RFC4P35249 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RFC4P35249 RCC2P3-201ENST00000418112 1537 ntBASIC23.71■■□□□ 1.39
RFC4P35249 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RFC4P35249 HOXB1-202ENST00000577092 1414 ntBASIC23.71■■□□□ 1.39
RFC4P35249 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.71■■□□□ 1.39
RFC4P35249 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC23.71■■□□□ 1.39
RFC4P35249 AL671883.3-201ENST00000603274 991 ntBASIC23.71■■□□□ 1.39
RFC4P35249 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RFC4P35249 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RFC4P35249 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.7■■□□□ 1.39
RFC4P35249 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RFC4P35249 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RFC4P35249 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RFC4P35249 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RFC4P35249 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RFC4P35249 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RFC4P35249 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RFC4P35249 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC23.7■■□□□ 1.38
RFC4P35249 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RFC4P35249 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RFC4P35249 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
RFC4P35249 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC23.7■■□□□ 1.38
RFC4P35249 AL590627.1-203ENST00000421194 1026 ntBASIC23.7■■□□□ 1.38
RFC4P35249 IGHV3-47-201ENST00000425060 335 ntBASIC23.7■■□□□ 1.38
RFC4P35249 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RFC4P35249 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RFC4P35249 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RFC4P35249 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.69■■□□□ 1.38
RFC4P35249 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFC4P35249 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RFC4P35249 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.69■■□□□ 1.38
RFC4P35249 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RFC4P35249 GABARAPL3-202ENST00000624044 1851 ntBASIC23.69■■□□□ 1.38
RFC4P35249 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFC4P35249 AKR1C7P-201ENST00000305623 895 ntBASIC23.69■■□□□ 1.38
RFC4P35249 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFC4P35249 TSPY12P-201ENST00000421279 868 ntBASIC23.69■■□□□ 1.38
RFC4P35249 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC23.69■■□□□ 1.38
RFC4P35249 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.69■■□□□ 1.38
RFC4P35249 ABR-204ENST00000543210 1049 ntTSL 2 BASIC23.69■■□□□ 1.38
RFC4P35249 GPR32P1-201ENST00000601788 811 ntBASIC23.69■■□□□ 1.38
RFC4P35249 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RFC4P35249 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
RFC4P35249 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.69■■□□□ 1.38
RFC4P35249 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms