Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA9P31269 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXA9P31269 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HOXA9P31269 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 AL512353.2-201ENST00000448759 1962 ntBASIC19.66■□□□□ 0.74
HOXA9P31269 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HOXA9P31269 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HOXA9P31269 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA9P31269 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXA9P31269 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXA9P31269 AC104390.1-201ENST00000555663 520 ntBASIC19.66■□□□□ 0.74
HOXA9P31269 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXA9P31269 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXA9P31269 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA9P31269 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HOXA9P31269 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.66■□□□□ 0.74
HOXA9P31269 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXA9P31269 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA9P31269 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA9P31269 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HOXA9P31269 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA9P31269 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA9P31269 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HOXA9P31269 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA9P31269 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA9P31269 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
HOXA9P31269 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA9P31269 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HOXA9P31269 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXA9P31269 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.65■□□□□ 0.74
HOXA9P31269 AP002414.4-201ENST00000589764 1148 ntBASIC19.65■□□□□ 0.74
HOXA9P31269 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HOXA9P31269 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXA9P31269 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HOXA9P31269 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.65■□□□□ 0.74
HOXA9P31269 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXA9P31269 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA9P31269 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HOXA9P31269 RCC2P3-201ENST00000418112 1537 ntBASIC19.65■□□□□ 0.74
HOXA9P31269 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXA9P31269 TEX21P-204ENST00000641479 1693 ntBASIC19.65■□□□□ 0.74
HOXA9P31269 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXA9P31269 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA9P31269 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXA9P31269 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXA9P31269 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HOXA9P31269 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.64■□□□□ 0.74
HOXA9P31269 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA9P31269 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA9P31269 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA9P31269 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA9P31269 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA9P31269 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA9P31269 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA9P31269 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
HOXA9P31269 KRT18P23-201ENST00000435622 1283 ntBASIC19.64■□□□□ 0.73
HOXA9P31269 NUS1P1-201ENST00000446295 882 ntBASIC19.64■□□□□ 0.73
HOXA9P31269 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA9P31269 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXA9P31269 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
HOXA9P31269 AC111152.3-201ENST00000569699 673 ntBASIC19.64■□□□□ 0.73
HOXA9P31269 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA9P31269 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXA9P31269 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA9P31269 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA9P31269 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA9P31269 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA9P31269 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA9P31269 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA9P31269 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXA9P31269 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA9P31269 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA9P31269 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HOXA9P31269 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXA9P31269 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXA9P31269 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA9P31269 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA9P31269 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXA9P31269 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA9P31269 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXA9P31269 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HOXA9P31269 AC010240.3-201ENST00000607688 395 ntBASIC19.63■□□□□ 0.73
HOXA9P31269 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXA9P31269 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA9P31269 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HOXA9P31269 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXA9P31269 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms