Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CD40P25942 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.3■□□□□ 0.2
CD40P25942 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 IRX1P1-201ENST00000438849 1838 ntBASIC16.3■□□□□ 0.2
CD40P25942 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CD40P25942 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CD40P25942 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CD40P25942 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.29■□□□□ 0.2
CD40P25942 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.29■□□□□ 0.2
CD40P25942 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.29■□□□□ 0.2
CD40P25942 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.29■□□□□ 0.2
CD40P25942 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.29■□□□□ 0.2
CD40P25942 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.29■□□□□ 0.2
CD40P25942 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.29■□□□□ 0.2
CD40P25942 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.29■□□□□ 0.2
CD40P25942 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CD40P25942 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.29■□□□□ 0.2
CD40P25942 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.29■□□□□ 0.2
CD40P25942 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CD40P25942 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CD40P25942 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CD40P25942 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD40P25942 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.29■□□□□ 0.2
CD40P25942 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.29■□□□□ 0.2
CD40P25942 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.28■□□□□ 0.2
CD40P25942 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.28■□□□□ 0.2
CD40P25942 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.28■□□□□ 0.2
CD40P25942 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.28■□□□□ 0.2
CD40P25942 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CD40P25942 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.28■□□□□ 0.2
CD40P25942 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.28■□□□□ 0.2
CD40P25942 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.28■□□□□ 0.2
CD40P25942 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.28■□□□□ 0.2
CD40P25942 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.28■□□□□ 0.2
CD40P25942 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.28■□□□□ 0.2
CD40P25942 MIR3180-5-201ENST00000583743 153 ntBASIC16.28■□□□□ 0.2
CD40P25942 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CD40P25942 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 AC036111.1-201ENST00000533973 1582 ntBASIC16.28■□□□□ 0.2
CD40P25942 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.28■□□□□ 0.2
CD40P25942 AC093484.2-201ENST00000580996 2166 ntBASIC16.28■□□□□ 0.2
CD40P25942 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.28■□□□□ 0.2
CD40P25942 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.28■□□□□ 0.2
CD40P25942 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.28■□□□□ 0.2
CD40P25942 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CD40P25942 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD40P25942 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.28■□□□□ 0.2
CD40P25942 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CD40P25942 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CD40P25942 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CD40P25942 FP475955.4-201ENST00000623131 1990 ntBASIC16.27■□□□□ 0.2
CD40P25942 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD40P25942 AL032819.2-201ENST00000624543 2162 ntBASIC16.27■□□□□ 0.2
CD40P25942 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CD40P25942 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CD40P25942 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD40P25942 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD40P25942 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD40P25942 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CD40P25942 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD40P25942 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.27■□□□□ 0.2
CD40P25942 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.27■□□□□ 0.2
CD40P25942 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms