Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.28■□□□□ 0.84
CD58P19256 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.28■□□□□ 0.84
CD58P19256 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.28■□□□□ 0.84
CD58P19256 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.28■□□□□ 0.84
CD58P19256 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.28■□□□□ 0.84
CD58P19256 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD58P19256 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD58P19256 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD58P19256 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD58P19256 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CD58P19256 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.27■□□□□ 0.84
CD58P19256 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CD58P19256 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.27■□□□□ 0.84
CD58P19256 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD58P19256 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD58P19256 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CD58P19256 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CD58P19256 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CD58P19256 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD58P19256 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CD58P19256 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.27■□□□□ 0.84
CD58P19256 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.27■□□□□ 0.84
CD58P19256 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CD58P19256 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CD58P19256 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.27■□□□□ 0.84
CD58P19256 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CD58P19256 MMP23A-201ENST00000234610 1017 ntBASIC20.27■□□□□ 0.84
CD58P19256 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CD58P19256 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CD58P19256 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CD58P19256 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD58P19256 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD58P19256 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CD58P19256 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CD58P19256 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD58P19256 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.26■□□□□ 0.83
CD58P19256 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD58P19256 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD58P19256 CYP2D8P-201ENST00000433633 1490 ntBASIC20.26■□□□□ 0.83
CD58P19256 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CD58P19256 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.26■□□□□ 0.83
CD58P19256 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CD58P19256 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.26■□□□□ 0.83
CD58P19256 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD58P19256 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CD58P19256 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD58P19256 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD58P19256 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CD58P19256 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD58P19256 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD58P19256 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
CD58P19256 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD58P19256 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.25■□□□□ 0.83
CD58P19256 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CD58P19256 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
CD58P19256 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.25■□□□□ 0.83
CD58P19256 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CD58P19256 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.25■□□□□ 0.83
CD58P19256 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.25■□□□□ 0.83
CD58P19256 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.25■□□□□ 0.83
CD58P19256 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.25■□□□□ 0.83
CD58P19256 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CD58P19256 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.25■□□□□ 0.83
CD58P19256 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.25■□□□□ 0.83
CD58P19256 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.25■□□□□ 0.83
CD58P19256 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.25■□□□□ 0.83
CD58P19256 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.25■□□□□ 0.83
CD58P19256 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CD58P19256 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD58P19256 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.25■□□□□ 0.83
CD58P19256 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.25■□□□□ 0.83
CD58P19256 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.25■□□□□ 0.83
CD58P19256 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms